Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1869 ATGATGGAGCTCGGGTACCTGAATCAGGGTCATCCTTGTAGAGGAGCAACACTTGTTACGCTTTCATTATTGCTTTTTACGCTAGTATTCTTCTCCACTTTCACACATGCTTCCTCTTCTTCTGTGTATCCGGAATTGAATCCTATAAAATCTAGGCACTCACGTCTTCTCAGGAGTGCCGTGCAACGTGAAACTcCTGCATCACAGCTTTCTGAACTATGGTCACCTCTGGAAAGCCAAGGATGGAAACCATGTGTTGAATCTCAAAATAAGCCAACATTAGCAGAGAAGTCCGAGGGATACATCCAGGTCTTTCTTGATGGAGGTTTGAACCAACAAAGGATGGGGATATGTGATGCAGTTGCTGTTGCAAAGATACTGAATGCTACTCTGGTGATCCCATACCTTGAATTAAATCCTGTATGGCAAGATTCAAGCTCCTTCATGGATATATTTGATGTGGATCATTTCATTGATGTATTGAAGGATGATATTTCTATAGTTAAAGAGCTGCCTGAAGAGTACTCCTGGAGCACAAGGGAGTACTATGCCACGGCTATTCGAGAAACCAGAATCAAGGCTGCACCTGTGCATGCATCAGCCCACTGGTATCTGGAGAATGTTTTGCCAGTTCTACAGAGTTATGGTATTGCTGCAATCTCTCCATTTTCTCATCGACTGAGTTTTGACAACTTGCCTATGGATATTCAACACCTGCGTTGTAAAGTCAACTTTCAAGCTTTAATCTTTGTTCCTCATATCAGAACACTTGGAGATGCTCTTATCAGCCGCCTTCGCTATCCTCATGGCTCAGTTGGAGAAACAGGCTCCAACTACCTTCAAGAGGTCACTGATGCAGGTGATAGTAAAAATGCAGGGAAATTTGTTGTTCTACACCTTCGATTTGATAAGGATATGGCAGCCCATTCAGCCTGCGATTTTGGAGGTGGAAAAGCTGAAAAATGGGCCCTTGCAAAGTATAGACAGGTGATTTGGCAGGGGAGGGTTCTTAATTCCCAATTCACTGATGAAGAGTTGAGGAGTCAAGGCCGTTGCCCGATGACTCCAGAAGAGGTTGGATTGTTGCTAGCGGCTCTCGGATTTGACAACAGCACTCGTTTATATCTTGCCTCTCACAAGGTCTATGGTGGAGAAGCAAGGATTTCAACTTTGAGGGAATTATTTCCTCtgatggaaaacaaaaaaagcctTGCTTCATCTGAGGAGCGTTCTCTGATAAAGGGAAAAGCTTCTCTACTAGCTGCACTTGACTACTATGTTGGCTTGCATAGTGACATCTTCATCTCTGCTTCCCCGGGAAACATGCACAATGCATTGGTTGGACACCGGACTTACTTGAACTTAAAGACTATAAGACCAAATATGGCATTGATGGGTCAGCTGTTCCTGAATAAAACCATTGAGTGGTCAGCGTTTCAGGATGCAGTGGTTGAAGGTCACCAAAATAGACAAGGGCAACTAAGGCTGAGGAAGCCGAAACAGTCCATATATACGTATCCAGCTCCTGATTGCATGTGCCAAGCTTAG 1548 0.4354 MMELGYLNQGHPCRGATLVTLSLLLFTLVFFSTFTHASSSSVYPELNPIKSRHSRLLRSAVQRETPASQLSELWSPLESQGWKPCVESQNKPTLAEKSEGYIQVFLDGGLNQQRMGICDAVAVAKILNATLVIPYLELNPVWQDSSSFMDIFDVDHFIDVLKDDISIVKELPEEYSWSTREYYATAIRETRIKAAPVHASAHWYLENVLPVLQSYGIAAISPFSHRLSFDNLPMDIQHLRCKVNFQALIFVPHIRTLGDALISRLRYPHGSVGETGSNYLQEVTDAGDSKNAGKFVVLHLRFDKDMAAHSACDFGGGKAEKWALAKYRQVIWQGRVLNSQFTDEELRSQGRCPMTPEEVGLLLAALGFDNSTRLYLASHKVYGGEARISTLRELFPLMENKKSLASSEERSLIKGKASLLAALDYYVGLHSDIFISASPGNMHNALVGHRTYLNLKTIRPNMALMGQLFLNKTIEWSAFQDAVVEGHQNRQGQLRLRKPKQSIYTYPAPDCMCQA 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1869 515 PIRSF UCP009360 7 515 IPR024709 -
Ssu2g1869 515 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 17 514 - -
Ssu2g1869 515 Pfam GDP-fucose protein O-fucosyltransferase 101 453 IPR019378 -
Ssu2g1869 515 CDD O-FucT_plant 101 458 IPR024709 -
Ssu2g1869 515 PANTHER O-FUCOSYLTRANSFERASE 39 17 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1869 Ssu-Chr2 70421902 70426151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1869 70 514 Miscellaneous Gene Families AT1G22460 33.978 1.71e-88 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1869 - - gmx:100817796 933.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1869 2 70421902 70426151 Ssu2g1869 2 70421902 70426151 ECH