Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1837 ATGAAGTTCATGAAACTGGGATCTCGTCCTGATACATTCTACACTGCGGAGGCAGTAAGGTCAGTCTCTTCTGAAGTTTCCAGTGACCTTATCATTCAAGTGAAGGGAAGTAGATATCTTCTTCACAAGTTTCCCTTGCTGTCCAAATGTTTGAGGCTACAAAAGTTATGTTCAGAATCTCCTGATTCTTCTTCTCAGCACCAAATAGTCCAACTTCCTGATTTCCCAGGTGGGGTTGAGGCATTTGAGTTGTGTGCTAAGTTCTGCTACGGAATAACCATCACTCTGAGCCCTTACAACATTGTAGCTGCACGATGTGGTGCTGAGTACCTGCAGATGACTGAGGAGGTTGAGAAGGGGAACTTAATTCAGAAGCTTGAGGTTTTCTTCAACTCGTGCATTCTACGTGGCTGGAAGGATGCTATTGTGAGTCTTCAGACCACAAAAGCGTTACCTATGTGGTCAGAGGACTTGGGAATTACCAGCAGAAGCATTGAAGCTGTTGCAGCAAAAGTCCTAAGCCACCCCTCTAAGGTGAGTTTGTCACATAGCCATTCCCGAAGGGTGAGGGATGATGTGTCCTGTAATGGCACAGAAAGTATGAGGCATAATAAGTCAGGAAACAAGGGATGGTGGGCTGAAGATTTGGCAGAACTGAGCATAGACCTATATTGGAGAACCATGATAGCTATCAAATCTGGTGGCAAGATTCCCTCGAATCTCATTGGAGATGCATTGAAAATCTATGCATCTCGGTGGCTACCAAATGTTACCAACAATGGACACCTCAAGAAGCAAGCTGTTTCTGACTCAGACTCGGAGTCGGTTAGTGAAATAGCTTCAAAACATCGTCTGCTTTTGGAATCAGTAGTGAGCTTGCTTCCAGCTGAGAAAGGTGCTGTTTCTTGTGGCTTTCTTCTGAAGCTCTTGAAGGCATCCAATATTCTTAACGCTTCTTCATCTTCAAAGATGGAATTGGCCAGAAGGGTAGGGCTTCAATTGGAGGAATCCACAGTGAGTGACCTTTTGATACCCTCACTGTCTCACACAAATGATACAGTGTATGATATTGACTTGGTGATGACCATATTGGAGCAGTTTATGTCACAAGGGCAGAGTCCCCCAACTAGCCCTGCGAGATCCAGGATGGCCTTTGAAAGAAGGAGGTCTCGTTCAGCAGAGAATATTAACTTGGAATTTCAAGAAAGTAGGAGGTCCTCTTCAGCATCTCACAGTTCAAAATTGAAGGTGGCTAAGCTTGTGGATAGGTATCTTCAAGAAGTTGCCAGAGATGTGAATTTTCACTTGTCGAAATTCATTGCTCTTGCTGAGATTATACCAGATTTTGCGAGACATGATCATGATGATCTCTACAGGGCTATTGACATTTTTCTTAAGGCTCATCCAGCACTCAACAAGAGTGAAAGGAAAAGATTGTGTCGAATTCTTGACTGCAAAAAACTGTCTATGGAAGCCTGCATGCATGCAGCACAAAATGAACTACTTCCCCTACGGGTTGTTGTCCAAGTTCTCTTCTTTGAGCAAGCTCGAGCAGCAGCAGCTGGTGGCAAAGTGACTGATTTGCCAACCAATATCAAGGCATTACTCACTGCACATGGTATTGACCCATCAAAACCTACAGCACCATTAAGCACTACTACAAGTATACATGCGGAGGATAATTGGAGTGTTTCTGGCTTCAAGTCACCAAAGTCAAGGTCTTCAACTCTGAGGATGAAGCTAGCTGAAGATGATGACTTCAACCAAAATGGTTTGCCCCATAATGGAATTGGAAGAAATTCTAGATTTAAGGCCATCTGTGCTAttccaacccaacccaaaaaAATGCTTAGTAAGTTCTGGTCTGCCAACAGAACTGCCACTGAAAAGAATTGA 1896 0.4335 MKFMKLGSRPDTFYTAEAVRSVSSEVSSDLIIQVKGSRYLLHKFPLLSKCLRLQKLCSESPDSSSQHQIVQLPDFPGGVEAFELCAKFCYGITITLSPYNIVAARCGAEYLQMTEEVEKGNLIQKLEVFFNSCILRGWKDAIVSLQTTKALPMWSEDLGITSRSIEAVAAKVLSHPSKVSLSHSHSRRVRDDVSCNGTESMRHNKSGNKGWWAEDLAELSIDLYWRTMIAIKSGGKIPSNLIGDALKIYASRWLPNVTNNGHLKKQAVSDSDSESVSEIASKHRLLLESVVSLLPAEKGAVSCGFLLKLLKASNILNASSSSKMELARRVGLQLEESTVSDLLIPSLSHTNDTVYDIDLVMTILEQFMSQGQSPPTSPARSRMAFERRRSRSAENINLEFQESRRSSSASHSSKLKVAKLVDRYLQEVARDVNFHLSKFIALAEIIPDFARHDHDDLYRAIDIFLKAHPALNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQARAAAAGGKVTDLPTNIKALLTAHGIDPSKPTAPLSTTTSIHAEDNWSVSGFKSPKSRSSTLRMKLAEDDDFNQNGLPHNGIGRNSRFKAICAIPTQPKKMLSKFWSANRTATEKN 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1837 631 Gene3D Potassium Channel Kv1.1; Chain A 15 123 IPR011333 -
Ssu2g1837 631 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 1 629 - -
Ssu2g1837 631 PANTHER OS12G0117600 PROTEIN 1 629 IPR043454 -
Ssu2g1837 631 SUPERFAMILY POZ domain 21 117 IPR011333 -
Ssu2g1837 631 ProSiteProfiles NPH3 domain profile. 210 517 IPR027356 -
Ssu2g1837 631 Pfam NPH3 family 211 493 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1837 Ssu-Chr2 69793347 69796158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1837 26 562 EF-hand Containing Proteins AT3G44820 34.168 1.43e-91 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1837 - - gmx:100797361 1117.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1837 2 69793347 69796158 Ssu2g1837 2 69793347 69796158 ECH