Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1810 ATGGCGATGTttgttccttcttcttcttccacttTCCGACCAACGTTGGTTCGCTGCTCCAACGAGCGCCGGGCGCTGTTTAGCCGCATTGCTCCTGTCTATGATAACCTGAATGATCTGCTGAGCCTTGGTCAACACCGGATTTGGAAGCGAATGGCGGTTTCGTGGGCTGGAGCGAAAATGGGAGACGTTGTGTTGGATGTGTGCTGTGGAAGTGGGGACTTATCCTTTCTCTTGTCCGACAAAGTTGGCTCTCATGGCAAGGTGATTGGTCTTGATTTCTCGAAGGACCAGCTATCGATTGCCTCATCTCGGCAGCACTTGCTTATAAAGAAGTGCTTCACGAATATTGAGTGGGTTGAAGGTGATGCGCTTGACATGCCATTTTCTGATGGTTGGTTTGATGCTATCACTATGGGCTATGGTCTTCGAAATGTGGTTGATAAGCATAAGGCCATGCAGGAAATTTTCCGTGTCCTAAAAGCTGGCTCTACAGTGTCTATCCTGGACTTTAATAAAAGCAATGAGTCACTAACTTCTTCAATTACGGAATGGATGATTGACAATATTGTTGTACCTGTGGCCTCTGGTTATGGTCTTTCAGAAGAATACAGATATCTCAAGAGTTCAATAAGAGAATTTCTAACAGGGAAGGAATTGGAGAAACTTGCCTTAGAAGTAGGATTTTCTGCCGCCCGACATTATGAGATCGGTGGAGGCCTCATGGGGTGTTTGGTAGCTAAGCGTTAG 750 0.4493 MAMFVPSSSSTFRPTLVRCSNERRALFSRIAPVYDNLNDLLSLGQHRIWKRMAVSWAGAKMGDVVLDVCCGSGDLSFLLSDKVGSHGKVIGLDFSKDQLSIASSRQHLLIKKCFTNIEWVEGDALDMPFSDGWFDAITMGYGLRNVVDKHKAMQEIFRVLKAGSTVSILDFNKSNESLTSSITEWMIDNIVVPVASGYGLSEEYRYLKSSIREFLTGKELEKLALEVGFSAARHYEIGGGLMGCLVAKR 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1810 249 ProSiteProfiles UbiE family SAM-binding methyltransferase profile. 17 249 IPR004033 GO:0008168
Ssu2g1810 249 PANTHER 2-PHYTYL-1,4-BETA-NAPHTHOQUINONE METHYLTRANSFERASE, CHLOROPLASTIC 10 249 - -
Ssu2g1810 249 Gene3D Vaccinia Virus protein VP39 29 249 IPR029063 -
Ssu2g1810 249 PANTHER METHYLTRANSFERASE 10 249 - -
Ssu2g1810 249 TIGRFAM MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 25 248 IPR004033 GO:0008168
Ssu2g1810 249 ProSitePatterns ubiE/COQ5 methyltransferase family signature 1. 34 49 IPR023576 GO:0008168
Ssu2g1810 249 Pfam ubiE/COQ5 methyltransferase family 24 243 IPR004033 GO:0008168
Ssu2g1810 249 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 11 241 IPR029063 -
Ssu2g1810 249 Hamap 2-phytyl-1,4-naphtoquinone methyltransferase [menG]. 22 249 IPR032904 GO:0042372|GO:0052624
Ssu2g1810 249 CDD AdoMet_MTases 65 163 - -
Ssu2g1810 249 Hamap Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 14 249 IPR004033 GO:0008168
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1810 60 186 Acyl Lipid Metabolism Gene Families AT1G48600 30.709 6.53e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1810 K23095 - gmx:100789470 455.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1810 2 69031039 69036043 Ssu2g1810 2 69031039 69036043 ECH