Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1777 ATGGAACCATATGCTGCGCAGTTATCTATTCGGCAGTTCagatttatAGTGCCAGATCAAAACAAGAAAGAGGGGGAATTTGTGAGAGagAGTGGTTTTAATTTGGATCTCGTAGCTAGCAACATATTGGTGCCTTCTGTAGGTTTGAATTCTGCTGCTCATGAAGGGATTAGCCTTGGGCTGAGAAAGGAGGATTATCTGAGTTTTGAGCTTTTGAAATGTATACAATTGATTGTTCAACTATTGATCTCTCAGATGTACAAACGGTCTAATGAAGAACAGGATGTAAGTAATAAGAAGGTTAGAAATTGTGATACATCAGAAAGCCAGTTTTCAAagTCCTGGCCTTCCCCTGCCTTGTGTTTTGTGGAGACAGTGCCTCAAGATGCGCAAAATTCTCATATTACAGCTTTTAATTCAGGCGATGGATCCTCAAAGTCAGATAATGAGTCAACCTCATCTAAGACCATACGGGATGTTCATATTTCAATGCGGTTAATGGAGGACTTTCTTGATCTTGCTAAAGAAAATACAGAAAAGGATCTGGAAACTTGTGGTATACTTGGTGCCTATCTTGAGAAGGGAACCCTCTATATGACTACCCTGATCATACCAAAGCAGGAATCAGCTTCCAATTCTTGTCAAGCTACAAATGAAGAggaagttttcaaaattctaaacGAAAGATCCCTTTATCCTGTGGGATGGATCCATACACATCCTTCTCAAAGTTGTTTCATGTCATCGGTGGATCTGCACACTCAATATTCCTACCAGGTGATGATTCCTGAGGCATTTGCCATTGTCTTAGCACCAAATGATACCATAAGGAGCTGTGGACTATTTCGCCTAACTGAACCTGAAGGAATGAATATTCTGAAAAATTGCCAGGAAACAGGATTTCATCCACACAAAGAACCAGATAATGGCAACCCTGTCTATGAGCACTGCTCCAATATGTACAAAAACTCCAATCTAAGGTTTGAAATCTTTGATTTACGGTTTAGTACTTCCCTCTGGACGttcatatttattttggatGCCAACTATCCACACTAA 1059 0.3872 MEPYAAQLSIRQFRFIVPDQNKKEGEFVRESGFNLDLVASNILVPSVGLNSAAHEGISLGLRKEDYLSFELLKCIQLIVQLLISQMYKRSNEEQDVSNKKVRNCDTSESQFSKSWPSPALCFVETVPQDAQNSHITAFNSGDGSSKSDNESTSSKTIRDVHISMRLMEDFLDLAKENTEKDLETCGILGAYLEKGTLYMTTLIIPKQESASNSCQATNEEEVFKILNERSLYPVGWIHTHPSQSCFMSSVDLHTQYSYQVMIPEAFAIVLAPNDTIRSCGLFRLTEPEGMNILKNCQETGFHPHKEPDNGNPVYEHCSNMYKNSNLRFEIFDLRFSTSLWTFIFILDANYPH 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1777 352 MobiDBLite consensus disorder prediction 134 156 - -
Ssu2g1777 352 PANTHER AMSH-LIKE PROTEASE 89 335 - -
Ssu2g1777 352 PANTHER FI19924P1 89 335 - -
Ssu2g1777 352 ProSiteProfiles MPN domain profile. 160 290 IPR037518 -
Ssu2g1777 352 SUPERFAMILY JAB1/MPN domain 160 289 - -
Ssu2g1777 352 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 157 264 IPR000555 GO:0005515|GO:0008233|GO:0008237
Ssu2g1777 352 Gene3D Cytidine Deaminase, domain 2 138 335 - -
Ssu2g1777 352 CDD MPN_AMSH_like 157 334 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Ssu2g1777 352 SMART pad1_6 159 287 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1777 Ssu-Chr2 68496863 68502764 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1777 K11866 - gmx:100807282 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1777 2 68496863 68502764 Ssu2g1777 2 68496863 68502764 ECH