Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1775 ATGGCAGATTCAAAACCAGGATTGAGGAAGCCAGTGTTCACCAAGGTTGATCAGCTTCGCCCGGGGACCAGTGGACACACTTTAACTGTGAAGGTGGTCAATGCTAAGATGGTGATGCAGAAAGGTCGTCCTGATGGTTCTCAATCCCGTCAAATGCGAATTGCTGAATGTTTGGTTGGTGATGAGACTGGAATGATCATATTCACCGCCAGAAATGATCAAGTGGATTTAATGAAAGAGGGTGCTACTGTGATCCTGCGTAATGCCAAAATTGACATGTTCAAAGGATCAATGAGGCTTGCTGTGGACAAGTGGGGCCGTGTGGAAGTCACAGAACCTGCTACTTTCACTGTGAAGGAAGATAATAACTTGTCTCTCATTGAGTATGAACTGGTGAATGTGGTTGTGGAATGA 414 0.4541 MADSKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRPDGSQSRQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGSMRLAVDKWGRVEVTEPATFTVKEDNNLSLIEYELVNVVVE 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1775 137 Gene3D - 23 126 IPR012340 -
Ssu2g1775 137 PANTHER - 4 135 - -
Ssu2g1775 137 SUPERFAMILY Nucleic acid-binding proteins 7 135 IPR012340 -
Ssu2g1775 137 PANTHER OS05G0244600 PROTEIN 4 135 - -
Ssu2g1775 137 CDD SoSSB_OBF 27 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1775 Ssu-Chr2 68457648 68460274 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1775 - - gmx:100526985 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1775 2 68457648 68460274 Ssu2g1775 2 68457648 68460274 ECH