Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1771 ATGGCAACACTCGCTCCCGGAATCGTGTTGAAGCTCCTCAACGGTCTGAACACGGGCCTGAAACCCACGAGCGAGCACCGAAGCTCGCTCTTGCAGGTCACTGACATCGTCCCCGCCGACCTTGACGAGAAAAATTTAATCCCCAAACAAGGCTTCTACATCAAGGTCTCTGACTCCTCGCACTCCATCTACGTGAGTCTTCCGTCCGACCAAGACGACGTCGTTCTCAGCAACAAAATGCAGCTCGGTCAGTTCATCTACGTTGAACGCTTGGAACCGGGGTCGCCGGTTCCCGTTCTCCGAGGCGCGAAGCCCCTCCCCGGAAGACACCCTCTGGTGGGCACGCCCGAGCCGTTAATGGGCCTGAGGGAACAAAAGCCCAATTCTGCGCCCAGAAGAGGCTCTTGGGGAACCGGACTCTACGGTGACGGGGTTTCGGTTTCTTCGCCTATGGTTTTTAAGCCGGTTAATTTGGACTTTGACCAATGTACCCCTGTGAAAGTCAAGAATGGCGGGTTTCAACCTTTGCCAATGTCGCCTTTGATTAGGGGGAAGGTTGGGAAAGAGGGGACTACTCCGTTTTCCGGTGTGAGGTGCTCTGTTGGTGGAGGGCTTCTGGCGAAAATGACCGACGCTAAAGGAGAAAGTCCTGCGTTACTTAGGAAAAGCTGCGTGGTAGCCACTTCTATGGAATTAGAGCAGGAGTGTTTCCGAACGAGAACATAG 726 0.5441 MATLAPGIVLKLLNGLNTGLKPTSEHRSSLLQVTDIVPADLDEKNLIPKQGFYIKVSDSSHSIYVSLPSDQDDVVLSNKMQLGQFIYVERLEPGSPVPVLRGAKPLPGRHPLVGTPEPLMGLREQKPNSAPRRGSWGTGLYGDGVSVSSPMVFKPVNLDFDQCTPVKVKNGGFQPLPMSPLIRGKVGKEGTTPFSGVRCSVGGGLLAKMTDAKGESPALLRKSCVVATSMELEQECFRTRT 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1771 241 MobiDBLite consensus disorder prediction 102 135 - -
Ssu2g1771 241 Pfam Plant protein of unknown function (DUF936) 4 121 IPR010341 -
Ssu2g1771 241 PANTHER EXPRESSED PROTEIN 1 230 IPR010341 -
Ssu2g1771 241 PANTHER OS01G0108800 PROTEIN 1 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1771 Ssu-Chr2 68335392 68336117 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1771 - - vun:114171354 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1771 2 68335392 68336117 Ssu2g1771 2 68335392 68336117 ECH