Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1714 ATGTCCGATCCTTCGAGGGGTCGCGTTACTATTACTCTTGGGCGTAGCGGTCAGGTTGTGAAGAGGGATATATCTGCTGTAGatgtttcttctttctcttctcttccctcaGCTGGCACTAAGCGGTCTGTAAGAGACAGAATTGGAAATAATGCAGATAGTTCTGTGTGGCATGGAAATGGACTTGGCGGCAACAAACGACAGCGAGGAGATAAAAGCATGCAAAATGGACTGGATGGCAATGATCTCCGATTGAAGCTCTTGCAAAAAAGTGCATCTAGGCAGGCTGACAGCAATGGCAGTAAGCGGCATATGGACCTCCGTGAAAAACTTTCAAAGGCAAATCACCCTCTGACAAACAGTTTTAATTCAAAGCAGCATGTGCCAGAGTCAAGGGAAACAAGTTTGTTAAGGCAAATTCCCTCAGCTAGAAGTTCTGATGATTTACTGCGTGTGGAATCCATGAGAAGTTCATACTCTCCTTGGACATTAGATCATATTAGGAGAAGATCACCAGATGGGTTTCCAAGTATTTCCAGGGGGATTTCCCCCCAAAGGGATGTCCAAGACCTACAGAGAAGGCCATTAAACAGGACATATGATGGTGTCAGATCAGTTCCATATGTAGGTAGGGATGTTCTTGAAAATTCAAGGCATCCAGTAAGTACACCTCAATCTTTCATGTCACGCTCCACAATGTCCACGTTGCCTCCAGTAACTGCTAAGCCTGTAGCATCTCATCCTGGCCAACTTCCTCCATCGAGCAGTGTTGCACAAAGGTCTTCATATGTGGGTGATGAACAAGTACAACAATCACACCAAACTGTGGATGGGTTGCTACATGCACTGGGACTTCAAAAATATGCCATTCTCTTCAAGGCTGAGGAAGTGGACATGACTGCATTGAaacagatgggagaaaatgacCTCAAAGAGCTTGGGATTCCTATGGGTCCGAGGAAAAAAATTCTTCTCGCTCTCTTGCCTCGTACCAAACGTCAACAATGA 1008 0.4335 MSDPSRGRVTITLGRSGQVVKRDISAVDVSSFSSLPSAGTKRSVRDRIGNNADSSVWHGNGLGGNKRQRGDKSMQNGLDGNDLRLKLLQKSASRQADSNGSKRHMDLREKLSKANHPLTNSFNSKQHVPESRETSLLRQIPSARSSDDLLRVESMRSSYSPWTLDHIRRRSPDGFPSISRGISPQRDVQDLQRRPLNRTYDGVRSVPYVGRDVLENSRHPVSTPQSFMSRSTMSTLPPVTAKPVASHPGQLPPSSSVAQRSSYVGDEQVQQSHQTVDGLLHALGLQKYAILFKAEEVDMTALKQMGENDLKELGIPMGPRKKILLALLPRTKRQQ 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1714 335 MobiDBLite consensus disorder prediction 249 270 - -
Ssu2g1714 335 MobiDBLite consensus disorder prediction 112 140 - -
Ssu2g1714 335 Gene3D - 273 335 IPR013761 -
Ssu2g1714 335 MobiDBLite consensus disorder prediction 31 79 - -
Ssu2g1714 335 MobiDBLite consensus disorder prediction 218 239 - -
Ssu2g1714 335 MobiDBLite consensus disorder prediction 216 270 - -
Ssu2g1714 335 SMART SAM_4 268 333 IPR001660 GO:0005515
Ssu2g1714 335 MobiDBLite consensus disorder prediction 114 140 - -
Ssu2g1714 335 ProSiteProfiles SAM domain profile. 271 334 IPR001660 GO:0005515
Ssu2g1714 335 SUPERFAMILY SAM/Pointed domain 272 327 IPR013761 -
Ssu2g1714 335 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 1 334 - -
Ssu2g1714 335 Pfam SAM domain (Sterile alpha motif) 271 327 IPR001660 GO:0005515
Ssu2g1714 335 PANTHER OSJNBA0060P14.15 PROTEIN 1 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1714 Ssu-Chr2 66705617 66713535 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1714 232 327 Glycosyltransferase AT3G07170 44.118 8.87e-18 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1714 - - gmx:100797199 595.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1714 2 66705617 66713535 Ssu2g1714 2 66705617 66713535 ECH