Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1674 ATGGATCAGTCACCATTCACGACTCCGAAAGGATCTCTGTCGTCCAGCATTGGAAACTCTGCAGAACTTGGGGCCAATCTCACACTCAGCGACAGGCTCAAGGTTTTCAAAAGCTCCACCTTTGATCCCAATGCCTATGTCGCCTCCAAATCCCGCAGCATGAACGAGaagGAGATAAGACACTTGTGCGCTTATCTTGTTGACCTGAAGAAGGCTTCAGCAGAAGAAATGCGCAAAAGTGTTCTTGCTAATTACTCAGCCTTCATACGTACATCCAAAGAGATTTCAGATCTTGAGGGAGAGCTGCTTTCCATGAGAAATCTTCTATCCACCCAGGCTGCTTTGGTTCATGGTTTAGCAGAAGGGTGCGAGCTTAGTTCCTTGATTAGTGGAAACGAAGATTCAGACATGGATGATATGCTGGATGAAAAAACAGATATATCCAAGACAGAAAAATGGCTAATAGGATATTTAGAAACCCTTGAAGTTCTATTAGCAGAAAAAAGAGTAGATGAAGCTATGGCTGCTTTGGACGAAGgagaaaaaatgtcaaaagaaattaGTGAAGGGAGATCTTTAAGTCCAAGTTTATTCCAGGCATTGCAAGCTGCCATTACTGAACACAGACAAAAACTAGCTGATCAACTAGCAGAAACTATCTGCCAGCCATCAACTCGCAGTGCAGAGATTCGATCAACAGCATTGGCATTGAAAATTCTTGGGGATGGTCCTCGTGCTCATACGTTACTACTAAATTCACACCAAGAAACGTTGCAGCGTAACATGAAAAGCCTTCAATCCACCACTTATGGTGGAGCTGGGGCATTTACTGCTACCCTTTCACAGCTTGTCTTTTCAACCATTTCACAAGCAGCATCAGATTCTTTGTCAGTGTTTGCTGAAGAAGAACCTGCATATACGTCTGAGCTAGTAACCTGGGCAGTTACACAGGCAGAGCAATTCGCTGTTCTCCTTAAGAAATGCATTCTTGCCTCTACAGCTGCTGCAGGAGGTTTGAGAGTGGCATCTGAATGTGTTCATGTTTGCATGAGTCACTGTTATCTGCTAGAGGCTAGTGGGCTGGCCCTTTCCCCTGTCTTACTCAAATATTTTAGGCCCTTCGTGGAGCAAGCACTGAAcacaaatttgaaaagaattgaACAAAGTAGTTCTGCACTGGCTGCTGCAGATGATTGGTTGCTTGCTTATGCACCAACCAGCAGCAGACACTCTGGCCTACCTCCATCTTCTTCTCATAGTAACTTAAGTTCATTCCAACCAAAGCTTTCAATCAGTGCTCACAAATTCAACTCAATGGTTCAgGAGCTATTTGAAGATGTAGGACCTCTTGAAATACTACAATTGGATGTTCTTGCAGTTGAAGGCCTTCTACAAGTGTTCAATTTCTATATCAATTTGCTAATAAATGCATTGCCAGGTTCAGTAGTAACTGAGAACCTGGAAGGTTCAGGGCACAAAATTGTTAAGATTGCTGAGACTGAAGCACAGCAGATGGCATTGCTGGCTAATGCAATATTGCTGGCAGATGAGCTGCTCCCACGTGCCGTAGTCAAGCTTTCACATAGTTCCAGAGGCGATGACTCTCAGAGAAGAGGATCAGATAAACACAGGCCTCCAGAACAGCGTGAACTGAAGAAAAGGCTCCAACGTGAAGTTGATCACCTGCGGGACAGTTTTTGCCGGCAACATGCTCTTGAACTTATCTTCACAGAAGAAGGGGAAGCACGTCTGAATGCATTAATATATTTGGGAATGGATGGTAATGTAGAACAACCTGAATGGTTTCCTTCTCCAATTTTTCAGGAGGTGTTTGCAAAGCTTACCGAAGTGGCAAGCATTGCATCAGATGTGTTTGTGGGAAGGGAAAGATTTGCCACTGTTTTATTGATGAGACTTGCAGAAACAGTGATCCTGTGGCTTTCTGATGACCAAACCTTCTGGGAAGAAGTTGAGACAGGATCAACCCCTTTGGGTCCCGTTGGCCTTCAACAGCTTTATTTGGATATGCAATTTGTGATGATATTTTCATCCCAAGGCCGTTACTTATCTCGTCATCTGCATCAAgctattaaaaacattattgctAGGGCTATTGGTGCTGTTGCTGCTACGGGTCTAGATCCCAACAGTGTCTTGCCTGAGGATGAGTGGTTCGTTGAAGTTTGTGAAATAGCTATAAAGATGTTAACTGGGAGAGCTGCCTTTGACAATGTAGAGGGAGATGTTACTAGCCCCACTTCATCTGTCCAAACATAA 2277 0.43 MDQSPFTTPKGSLSSSIGNSAELGANLTLSDRLKVFKSSTFDPNAYVASKSRSMNEKEIRHLCAYLVDLKKASAEEMRKSVLANYSAFIRTSKEISDLEGELLSMRNLLSTQAALVHGLAEGCELSSLISGNEDSDMDDMLDEKTDISKTEKWLIGYLETLEVLLAEKRVDEAMAALDEGEKMSKEISEGRSLSPSLFQALQAAITEHRQKLADQLAETICQPSTRSAEIRSTALALKILGDGPRAHTLLLNSHQETLQRNMKSLQSTTYGGAGAFTATLSQLVFSTISQAASDSLSVFAEEEPAYTSELVTWAVTQAEQFAVLLKKCILASTAAAGGLRVASECVHVCMSHCYLLEASGLALSPVLLKYFRPFVEQALNTNLKRIEQSSSALAAADDWLLAYAPTSSRHSGLPPSSSHSNLSSFQPKLSISAHKFNSMVQELFEDVGPLEILQLDVLAVEGLLQVFNFYINLLINALPGSVVTENLEGSGHKIVKIAETEAQQMALLANAILLADELLPRAVVKLSHSSRGDDSQRRGSDKHRPPEQRELKKRLQREVDHLRDSFCRQHALELIFTEEGEARLNALIYLGMDGNVEQPEWFPSPIFQEVFAKLTEVASIASDVFVGRERFATVLLMRLAETVILWLSDDQTFWEEVETGSTPLGPVGLQQLYLDMQFVMIFSSQGRYLSRHLHQAIKNIIARAIGAVAATGLDPNSVLPEDEWFVEVCEIAIKMLTGRAAFDNVEGDVTSPTSSVQT 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1674 758 PANTHER EXOCYST COMPLEX COMPONENT 8 9 757 IPR033961 GO:0000145|GO:0006887
Ssu2g1674 758 Coils Coil 198 218 - -
Ssu2g1674 758 Pfam Vps51/Vps67 36 114 - -
Ssu2g1674 758 Pfam Exocyst component 84 C-terminal 152 363 IPR032403 -
Ssu2g1674 758 MobiDBLite consensus disorder prediction 529 551 - -
Ssu2g1674 758 Gene3D - 273 377 IPR042560 -
Ssu2g1674 758 PANTHER EXOCYST COMPLEX COMPONENT EXO84A 9 757 - -
Ssu2g1674 758 Gene3D - 142 264 IPR042561 -
Ssu2g1674 758 SUPERFAMILY Cullin repeat-like 144 379 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1674 Ssu-Chr2 65801944 65807532 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1674 K19986 - gmx:100818886 1291.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1674 2 65801944 65807532 Ssu2g1674 2 65801944 65807532 ECH