Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1671 ATGATGGATTTTAGCCACCCTTCAGTTCTTCTGCTCTGCATTTCCCTTCTCTTGCTTCCTTCTTTGATCTCATCTCAAATCTGCCAGAGAAACTGTGGCAAAGAAACTCTAAGGTATCCTTTTGGCAGTGGCCCTGGTTGTGGCGACCCTCGCTTCCAACCACATGTGACATGTAGCCAACAAAAGCTCACCTTCACCACCCACACAGGGTCCTACCCTGTTACCTCAATTGACTATACCAACCAAGTCATATACATCTCTGATCCCACCATTTCAACATGCTCTTGCACTGTCCCTAGCAAAGGCTTTGGCTTAAATTGGGACGCCCCATTTACCTTTGCTGATAGCACCATCTTTGCTCTAGTAGACTGTGCTATGAACTCATCATCTATATGCAAATCAAACGGCTACGATGATGGGAGCAACTCTAAGCTTCTATGTGATCAAGGGACACCAATTTGCAGTCTTCTATATTCATGCAGTCCTATTAGTACCATCAACCTCCCAATTTCAACATGTTGCGTTTACACGCCGGTTAATCTTGGTCCATCGTTTGAAATGGATCTGCAGAAGCTGCAATGCCCTTCATACACGGGGTTTTACAACTTCAATGATCAGCAAACGGATCCTGAAAAGTGGAACTATGGAATAGCACTTAAGTACAAGTTCAGTGTCACAAACGACTATCCTGGCTCATGCGCTGCTTGTGAAAGGAGTTATGGAGTGTGTGGGTATGGTGGAGCCTATAACACATTTATCTGCAACTGTCCTAATGGGATTAACACAACAACAGATTGTTTCTTCGCATCACCTTATAATAATGGTTTTAGAAATGGGGTTGCTTGGTTGATCTATCCTGTGGCATGGTCTCTCGTTTGGTTCTTCTTGTGA 891 0.4411 MMDFSHPSVLLLCISLLLLPSLISSQICQRNCGKETLRYPFGSGPGCGDPRFQPHVTCSQQKLTFTTHTGSYPVTSIDYTNQVIYISDPTISTCSCTVPSKGFGLNWDAPFTFADSTIFALVDCAMNSSSICKSNGYDDGSNSKLLCDQGTPICSLLYSCSPISTINLPISTCCVYTPVNLGPSFEMDLQKLQCPSYTGFYNFNDQQTDPEKWNYGIALKYKFSVTNDYPGSCAACERSYGVCGYGGAYNTFICNCPNGINTTTDCFFASPYNNGFRNGVAWLIYPVAWSLVWFFL 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1671 296 Pfam Wall-associated receptor kinase C-terminal 205 258 IPR032872 -
Ssu2g1671 296 Pfam Wall-associated receptor kinase galacturonan-binding 28 88 IPR025287 GO:0030247
Ssu2g1671 296 PANTHER WALL-ASSOCIATED RECEPTOR KINASE, GALACTURONAN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 8 293 - -
Ssu2g1671 296 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 8 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1671 Ssu-Chr2 65751329 65752327 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1671 31 125 Receptor kinase-like Gene Family AT5G02070 33.000 1.94e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1671 - - gmx:100788392 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1671 2 65751329 65752327 Ssu2g1671 2 65751329 65752327 ECH