Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1670 ATGGAAGAAGGTGTGAAATTGGAGAACAGATGGGGATACCCGGTTGCAACTTCCTCTCAGGCCTGCGTTTCAGCCATCAACTCCTACTACCATCAGGTTCTCAGCTATGGTAGAGAGAGGTCTGTGATTCTGAAAGCAGTGGCACATGACAAACGCTGTGTCTTGGCCAACATCTTAGCAGCACATTTCCTTTACTCATCGGATTCTTCTCGTGCTTCCACTTATTTTGATGCCGCTGAGTCTCACCTTGAACATGCCACCTTGTACGAGAAACTAGTTTTCGATACCATCACTTATTTGCTATCCGAAGATAGAGACGATGATGTAGCTGTTGAATTGCATTCTAAGtTTCTAAAAGAGTTCCCAAGAGATCTGGTTTCTCTTAAGAGAGCACAAGTCTTATGCTTCTACATGGGTCTGCCTGGTCTTTCTTTATCTCTTGTTCAACAGGTTTTAGCTCaaaatgaaggagaaaattaCATATATGGCATGCTTGCTTTCCCTTTATTGGAGCTTGGACGGATGGAGGATGCTGAGAAAGCAGCCAGAAAGGGATTTGAAATCAATAAGGAAGACAGCTGGTCACAGCATGCTTTATGCCATGTTCTTCAGTATAAGTGCTGTTTTAGAGAAGCTGTTAAGTTCATGGAAGAATGTTCATCATCATGGagttcttcttcatcttttatGTTGACGCACAATTGGTGGCATGTAGCACTTTGTTACTTAGAAGGTAATGCTCCAAGGCAAAGAGTGCTAGAGATATATGACAATTATATATGGAAGGAGCTAGACAAAAATGATTCTGCGAGTGCAGAGGTTTACTTAAACGCTGGGGGTCTGCTTTTGCGGTTGTATGTACATGGTGAATTGGATATCTTTGGTGATCGTCTCAAGATGCTTGCAGAATGCCTAACTAATGAAGCAAACTGGTATATAGAGTGGCATTTTGATGTATTGATAGTGTGGACTTTGGCAAAGACTGGAGAAATTTCTAAAGCAGAAGATCTTCTAAAGGGCTTAAAAAGCAGGTTTTTGAGGATGACTAAAAAGAAGCGACAACGAATGCAGCGAGGAATGATGCTTGCAGAAGCACTTTATGCGTATGGAAGAGGTGACGACAGACAGGGACTGGAATTACTTGATCCGGATTTTGATGCCACTGATTATAAGATCATTGGGGCATCTGATGAACAAGTCGATGTATTCAATGAAGTTTGGTATAACATGTTGCTGAATAGCGGAGAAGCGTTGAAGGCAATCGAAGTGTTAGAGAAGCAAATCAAGAAGAGAGATGGCGTCCCCTACTTGTGGCGTCTACTTGAGAGGGGATACAAACTAGCTAACAaggtagaagaagaaagaattgcGAACGAGAAGGCCACGGCTTTGGAGAGtcgttattttaattaa 1413 0.4062 MEEGVKLENRWGYPVATSSQACVSAINSYYHQVLSYGRERSVILKAVAHDKRCVLANILAAHFLYSSDSSRASTYFDAAESHLEHATLYEKLVFDTITYLLSEDRDDDVAVELHSKFLKEFPRDLVSLKRAQVLCFYMGLPGLSLSLVQQVLAQNEGENYIYGMLAFPLLELGRMEDAEKAARKGFEINKEDSWSQHALCHVLQYKCCFREAVKFMEECSSSWSSSSSFMLTHNWWHVALCYLEGNAPRQRVLEIYDNYIWKELDKNDSASAEVYLNAGGLLLRLYVHGELDIFGDRLKMLAECLTNEANWYIEWHFDVLIVWTLAKTGEISKAEDLLKGLKSRFLRMTKKKRQRMQRGMMLAEALYAYGRGDDRQGLELLDPDFDATDYKIIGASDEQVDVFNEVWYNMLLNSGEALKAIEVLEKQIKKRDGVPYLWRLLERGYKLANKVEEERIANEKATALESRYFN 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1670 470 CDD StaR_like 49 408 IPR033891 -
Ssu2g1670 470 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Ssu2g1670 470 SUPERFAMILY TPR-like 104 229 IPR011990 GO:0005515
Ssu2g1670 470 Gene3D Tetratricopeptide repeat domain 27 468 IPR011990 GO:0005515
Ssu2g1670 470 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 38 9 467 IPR033891 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1670 - - gmx:100789977 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1670 2 65718009 65724883 Ssu2g1670 2 65718009 65724883 ECH