Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1655 ATGTCGGGTGCAGAGGATAAGGGAAAAAAACTCTCTGGCTTTCCTTctgtttctctctcttcttggtCACATCTATGCTGTAGAAGTGGCATTCCTTCAACTTCAacaacagaaaaagaaaaaaacagtgAAGCACTACGCAAAACTAGTTCAGGATCAGCCAATAAGAAGCCAGGAGGATGGAAGGCTATGCCTTTTATTTTAGGCAATGAAACGTTTGAGAGATTGGCAGCATTTGGTTTGTTTGCTAACTTGATGGTGTATTTGACAAGAGAGTTTCATTTAGATCAAGTATATGCTTCAAATATTCTCAATATATGGAGTGGTATTACCAACTTTTTCCCTTTGGTTGGCGCCTTCATTTCTGATGCCTATGTGGGTCGCTTCCGGACTATAGCTTTtgcttccttttcttctctgcTGGGGATGGTCGTCGTGACTTTAACCACGTGGTTACCAGAGTTGCATCCTCCACCTTGTACTCCTCAGCAACAAGCATTGAATCAATGTGTAAGAGCTAGCACGCCCCATCTGAGTGTTCTACTAACGGGACTTTGCCTTTTAAGCATAGGTTCTGCTGGCATAAGGCCATGTAGTATCCCATTTGGTGTGGATCAATTTGACCCCGCCACAGATGAAGGGAAGAAAGGGATCAATAGCTTCTTTAATTGGTACTACACCACTTTCACAGTGGTGTTGTTGATCACTCAAACAGTGGTTGTCTATATCCAAGACTCTGTTAGCTGGAAGATAGGTTTTGCCATCCCAACCCTGTGCATGTTCTGCTCCATCATTATGTTCTTTGTGGGAACAAAGATCTACGTGCATGTGAAGCCAGAAGGAAGCATTTTCTGTAGTATTGCACAAGTTCTAGTGGCTGCTTACAGAAAGCGAAAAATTGAGGTTCCAAGTGAGAAGCAACGGGTTTTCTATGATCCTCCACTTAATGGGACTCACGTTTTGTCAAAGCTACCGTTGACCAACCAATTCCGggGTTTGAATAAAGCAGCTGTAATAATGGAGGGGGAGCTAAACCCAGATGGGAGTAGAGTAAATCAGTGGAAACTTGTCAGCATCCAGCAAGTGGAAGAGGTAAAATGCTTGGCAAGAATTTTCCCAATCTGGGCTGGTGGGATCCTTGGTTTAACTTCCATGGCACAACAAGGAACATTTACTATATCACAAGCCTTGAAAATGGACAGACACCTTGGACCCAAATTCCAAATCCCAGCTGGTTCACTTGGAGTCATATCATTCATCACCATAGGTGTGTGGGTTCCATTCTATGACAGAATCATGGTGCCAGCACTAAGAAGAGTCACTAAGCATGAAGGGGGCATTACTCTCCTCCAGAGAATTGGAATTGGCATGGTGTTCTCCCCTCTGTCCATGATTGCTGCTGCATTGGTGGAAAAAGTGAGAAGAGATTTAGCAAATGCAAATCCAAGTCCGCTGGGAATTGCCCCTATGTCAGTCCTGTGGCTGGTCCCACAATTAGTCCTGATGGGTCTGTGTGAGGCATTCAATATAATTGGACAAATTGAGTTCTTCAACCGGCAATTTCCAGATCACATGAGAAGCATTGCTAATTCCTTGTTCTCTTGTTCCTTTGCTGGGGCTAGCTATGTTAGCAGTGCACTAGTCACCACTGTTCATCATGCCACTAGAACACATAGCCATCCAGATTGGTTGACAAATGACATAAATGCTGGCAGGCTGGATTACTTTTACTATCTGATAGCAGGGATTGGAGTCCTcaacttcatttattttctgtATGTGGCTCAAAGATATCATTACAAGGGAAGTGTAGACCTCCAAGATAAAGCTCAAGATGTGGAGTTAGATTCAAAAGGAGAATTAGATTACTATAGTGCTGGGTATGAAGattctaaataa 1899 0.4139 MSGAEDKGKKLSGFPSVSLSSWSHLCCRSGIPSTSTTEKEKNSEALRKTSSGSANKKPGGWKAMPFILGNETFERLAAFGLFANLMVYLTREFHLDQVYASNILNIWSGITNFFPLVGAFISDAYVGRFRTIAFASFSSLLGMVVVTLTTWLPELHPPPCTPQQQALNQCVRASTPHLSVLLTGLCLLSIGSAGIRPCSIPFGVDQFDPATDEGKKGINSFFNWYYTTFTVVLLITQTVVVYIQDSVSWKIGFAIPTLCMFCSIIMFFVGTKIYVHVKPEGSIFCSIAQVLVAAYRKRKIEVPSEKQRVFYDPPLNGTHVLSKLPLTNQFRGLNKAAVIMEGELNPDGSRVNQWKLVSIQQVEEVKCLARIFPIWAGGILGLTSMAQQGTFTISQALKMDRHLGPKFQIPAGSLGVISFITIGVWVPFYDRIMVPALRRVTKHEGGITLLQRIGIGMVFSPLSMIAAALVEKVRRDLANANPSPLGIAPMSVLWLVPQLVLMGLCEAFNIIGQIEFFNRQFPDHMRSIANSLFSCSFAGASYVSSALVTTVHHATRTHSHPDWLTNDINAGRLDYFYYLIAGIGVLNFIYFLYVAQRYHYKGSVDLQDKAQDVELDSKGELDYYSAGYEDSK 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1655 632 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 47 609 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ssu2g1655 632 Coils Coil 631 632 - -
Ssu2g1655 632 Pfam POT family 129 557 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ssu2g1655 632 Gene3D MFS general substrate transporter like domains 33 605 IPR036259 -
Ssu2g1655 632 MobiDBLite consensus disorder prediction 32 56 - -
Ssu2g1655 632 CDD MFS_NPF1_2 64 598 - -
Ssu2g1655 632 PANTHER PEPTIDE/NITRATE TRANSPORTER 47 609 - -
Ssu2g1655 632 SUPERFAMILY MFS general substrate transporter 77 596 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1655 Ssu-Chr2 65493170 65502998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1655 55 621 Organic Solute Cotransporters AT1G69870 62.021 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1655 - - gmx:100815154 1105.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1655 2 65493170 65502998 Ssu2g1655 2 65493170 65502998 ECH