Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1654 ATGCACTTCCTCACAGCACCCTCCCCTTGGCTGCTCTCTCCCCATTTGCCCCCTTCCCTCGTCCCCCCACGCTCCTCCGGCTCGACCGGGCGGGTGCGCCGGTTCGCAGTTCTGAACGAACCCGGTTCGGTTCTCGAATCTCTCTGGAAGGGGAACTGCTACAAGGGTTTGTGCTGGTCCTGCTCCGGGTTCTTGCGGCGGTGCAAGGATTGGCAGGGGGAGTTCTCCTCTCTGGAGTCCGAGATTTTGGAGTTCATGCAGAGCTCCGATAAGCCCGAAGCGTTTCCCACGAAGGAGGAGTTGGTTGCTGCAGGGAGGGTGGATTTGGTCAACGCTATTGTCAATGAAGGAGGGTGGCTTGCGTTTGGGTGGGATTTGAATGATGGGTCGGGTGAAATTCGCGGTTTTGATGATAGGAGTGGCGGTGGAATTGACGGTAATGCGACTCGGGCTTCTGGGGttggttcttcttcttcttcttctcaaacAGATGGATCAGTGGAAATTGAAGCTGATGAATCTGGCATTGAGGGTATATTGAATCGGTTGGAGAAACAAAGAAGTAGTTTTTTGGGACTTGGTTTTATAGAGAAAGAAGATAGTATTTCTTCcaagaataatgaagataaagATGATTGGGATCATAGAACAACTACGGATGCAATAGCTGCTGGCCTTGAAAATCGTAGCAGAGCATCCTCATTGAACCCTACAAGCAGTCATCTTAGTGGTTCTCAGATCAAACATGATCAGCACGAATCTCAATCAGGTActgaaaatttaagaaactcGCTTAAGTCAGAGATGTGGAGGAGTTGGATTATTCAGAGAACTGGTTTTTCAGATGCAGATTTTGAAGATGCTGAAATTGTTCCGGGTGAAACTCAGAAAGGAGGCATTAGTGATGCTTCAGGACAACCCGATATCCTCAACGAAAGGGAGTTTTCTTCTGAACTTATAAACAGAGGAACAGGATTATATTCTCTCGATGGAAATGCAAATCATAATGACATTAAATCCCGTATCCAGTATCTAGAATCAGAGCTAGCTTCTATACTTCATTTGTTGAGGTCTAGCACAGATAAAGTTACAATGCAGACGGACCGGAAGAGCTCTTCTGATTATCTAGCAAAGCTTTCCGATGCTTGGGAATTCCAGGAAAATGAGATCATGAATGCTCAGGACAGATTGCGTTCTATACGGGCTAAGTTGGCAGTGTTAGAAGGAAAGATGGCAATGGCAATAATGGATGCACACAAGGTAGTCGAAGAAAAGCAGAAGAAGATTAATAATGCTCAAAAAGCTTTGCAAATTCTGAAGAGTACTTGTGTAGTTTGGCCCAATAATGCTTCAGAAGTACTTTTGACAGGATCATTTGATGGTTGGTCCACCAAGAGAAGGATGGAAAGGTTAAGTAGTGGTATGTTTTCTTTGAGCTTGCAGCTGTATCCTGGAAGATATGAGATGAAGTTCATCGTAGATGGAGAATGGAAAATTGATCCGTTGCGCCCTGTTGTTATCAGCAATGGCTATGAGAATAATCTTCTCATTATTAGTGATTGA 1563 0.437 MHFLTAPSPWLLSPHLPPSLVPPRSSGSTGRVRRFAVLNEPGSVLESLWKGNCYKGLCWSCSGFLRRCKDWQGEFSSLESEILEFMQSSDKPEAFPTKEELVAAGRVDLVNAIVNEGGWLAFGWDLNDGSGEIRGFDDRSGGGIDGNATRASGVGSSSSSSQTDGSVEIEADESGIEGILNRLEKQRSSFLGLGFIEKEDSISSKNNEDKDDWDHRTTTDAIAAGLENRSRASSLNPTSSHLSGSQIKHDQHESQSGTENLRNSLKSEMWRSWIIQRTGFSDADFEDAEIVPGETQKGGISDASGQPDILNEREFSSELINRGTGLYSLDGNANHNDIKSRIQYLESELASILHLLRSSTDKVTMQTDRKSSSDYLAKLSDAWEFQENEIMNAQDRLRSIRAKLAVLEGKMAMAIMDAHKVVEEKQKKINNAQKALQILKSTCVVWPNNASEVLLTGSFDGWSTKRRMERLSSGMFSLSLQLYPGRYEMKFIVDGEWKIDPLRPVVISNGYENNLLIISD 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1654 520 Gene3D Immunoglobulins 439 520 IPR013783 -
Ssu2g1654 520 MobiDBLite consensus disorder prediction 229 245 - -
Ssu2g1654 520 PANTHER PROTEIN PTST HOMOLOG 2, CHLOROPLASTIC 39 519 - -
Ssu2g1654 520 MobiDBLite consensus disorder prediction 224 260 - -
Ssu2g1654 520 Pfam Glycogen recognition site of AMP-activated protein kinase 442 518 IPR032640 -
Ssu2g1654 520 PANTHER PROTEIN PTST HOMOLOG 3, CHLOROPLASTIC 39 519 - -
Ssu2g1654 520 SUPERFAMILY E set domains 442 519 IPR014756 -
Ssu2g1654 520 Coils Coil 376 410 - -
Ssu2g1654 520 CDD E_set_AMPKbeta_like_N 441 518 - -
Ssu2g1654 520 MobiDBLite consensus disorder prediction 137 169 - -
Ssu2g1654 520 Coils Coil 415 442 - -
Ssu2g1654 520 MobiDBLite consensus disorder prediction 150 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1654 Ssu-Chr2 65443869 65448821 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1654 - - gmx:100814629 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1654 2 65443869 65448821 Ssu2g1654 2 65443869 65448821 ECH