Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1649 ATGGAACTAGAGGCCCGCCAAGTTAGCACATGGGAAGGCTATGTGGACTGGAGGAACAAGCCTGCTCTTAGAGGCCGCCATGGAGGCATGCTGGCAGCCTCCTTTGTTCTGGTGGCGGAGATATTGGAGAATCTGGCGTTTTTGGCGAATGCGAGCAATTTGGTGTTGTACCTGAAGCAGTATATGCATATGTCCCCTTCAAAGTCTGCTAACAATGTCACCAATTTCATGGGAACGGCCTTCCTTCTTGCCCTCCTCGGTGGTTTCTTATCCGATGCCTTTTTCACCACTTATCGTGTCTACCTGATAAGTGCAGTTGTTGAGTTCCTGGGTCTGATTGTACTCACCATCCAAGCTCGCGAGCCTTCATTAAAGCCACCGGAGTGTGACCTACACACCCCATGTCAAGAAGTTAATGGTGGCAAAGCAGCAATCCTGTTCGCTGGCCTCTATGTGGTGGCTCTAGGGGTTGGAGGAATCAAAGGGTCACTGCCAGTACACGGTGGTGAGCAATTTGATGAAACCACCCCATCTGGAAGGAAGCAGAGATCAACCTTCTTCAACTACTTTGTCTTCTGCCTATCATGTGGTGCCCTCATTGCAGTTACTTTTGTAGTGTGGATTGAAGACAACAAAGGGTGGCAATGGGGTTTTGCAATATCTACTATTAGCATATTTGTATCTATCCCAGTGTTCCTGGCTGGTTCAGCTACTTACAAGAACAAGATTCCTTCAGCAAGTCCACTTACAACCATTTTAAAGGTTCTTGTTGCTGCTTTACTGAATAGCTGCACCTACAAAAACACTAGCAGTGCAGTTGTGAATATGGCTTCAAGCCCTTCTAATCCACACTCAGGTAGAATGGAATCAGAACAAGAAACTGTAAAAGCAAGCACAACAACTGAAACTCCAACAAGCCACCTCAAATTTCTTAACAAAGCAGTTACAAACAAGTCAAGGTATTCATCACTAGAATGCACTGTACAACAAGTAGAAGATGTCAAGGTAGTATTGAAAGTACTACCCATATTTGCTTGTACCATCGTTCTTAATTGTTGCCTAGCTCAGTTGTCCACATTCTCTGTTGAACAAGCTGCTACTATGAACACCAAGCTTGGTTCCCTAAAGGTGCCACCATCTTCATTACCAATTTTCCCCGTGATATTCATCATGATCCTAGCACCAATTTATGACCACATTATCATACCCTACACTAGGAAAGTGACCAAATCAGAAATGGGCATCACTCACCTCCAGAGGATTGGGTTTGGACTAGTACTCTCCATAGTTGCCATGGCAGTGGCTGCTCTTGTTgaaatcaaaaggaaaagggTGGCCACTCACTCGGGCCTACTTGATGATCCAACTAAGCCACTGCCTATCACATTCTTATGGATTGCTTTCCAATACTTATTCCTTGGGTCTGCTGATCTTTTCACCCTTGCTGGGTTATTGGAATTTTTCTTCTCAGAAGCACCAATAAGGATGAGATCCTTGGCCACATCTCTTTCCTGGGCCTCTTTGGCAATGGGGTACTACCTAAGTTCAGTGATTGTATCTATAGTAAACAATGTCACTGGAAACAGCATTCACAAACCATGGCTAGATGGTGCCAACTTTAACCACTATCACCTAGAGAAGTTCTATTGGCTCATGTGTGTGCTAAGTGGGTTGAACTTTCTACATTACCTGTTTTGGGCAACCAGGTACAAATATAGAGGGACAGGTACTGCTAATGAATGA 1743 0.4423 MELEARQVSTWEGYVDWRNKPALRGRHGGMLAASFVLVAEILENLAFLANASNLVLYLKQYMHMSPSKSANNVTNFMGTAFLLALLGGFLSDAFFTTYRVYLISAVVEFLGLIVLTIQAREPSLKPPECDLHTPCQEVNGGKAAILFAGLYVVALGVGGIKGSLPVHGGEQFDETTPSGRKQRSTFFNYFVFCLSCGALIAVTFVVWIEDNKGWQWGFAISTISIFVSIPVFLAGSATYKNKIPSASPLTTILKVLVAALLNSCTYKNTSSAVVNMASSPSNPHSGRMESEQETVKASTTTETPTSHLKFLNKAVTNKSRYSSLECTVQQVEDVKVVLKVLPIFACTIVLNCCLAQLSTFSVEQAATMNTKLGSLKVPPSSLPIFPVIFIMILAPIYDHIIIPYTRKVTKSEMGITHLQRIGFGLVLSIVAMAVAALVEIKRKRVATHSGLLDDPTKPLPITFLWIAFQYLFLGSADLFTLAGLLEFFFSEAPIRMRSLATSLSWASLAMGYYLSSVIVSIVNNVTGNSIHKPWLDGANFNHYHLEKFYWLMCVLSGLNFLHYLFWATRYKYRGTGTANE 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1649 580 MobiDBLite consensus disorder prediction 277 304 - -
Ssu2g1649 580 Pfam POT family 99 529 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ssu2g1649 580 Gene3D MFS general substrate transporter like domains 3 578 IPR036259 -
Ssu2g1649 580 PANTHER PROTEIN NRT1/ PTR FAMILY 4.6-LIKE 13 575 - -
Ssu2g1649 580 SUPERFAMILY MFS general substrate transporter 32 571 IPR036259 -
Ssu2g1649 580 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 13 575 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ssu2g1649 580 CDD MFS_NPF4 30 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1649 Ssu-Chr2 65262158 65268637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1649 1 577 Organic Solute Cotransporters AT1G69850 72.867 0.0 851
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1649 - - gmx:100801999 1054.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1649 2 65262158 65268637 Ssu2g1649 2 65262158 65268637 ECH