Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1648 ATGGCGTTCAAGATCAAGAACGCCCCGtctttcctcctcctcctcaccATCTTCTTCTACACGGCCGCGACCATTCAAGAGGGAACAAGCAGCACGGGCGGGCACTGGGTTCAGCTGCAGCGCAGCATAGGCATCTCCGCCATGCACATGCAGGTAATGATCGACAACAAGGTGATCATCTTCGACCGCACCGACTTCGGCCCCTCCAACATCTCCCTCTCCCACCACCGCTGCCGCTTCAACCCGCGGGACCTCGCCCTCAAGCTCGACTGCACCGCCCACTCCGTCCTCTACGACCTCGCCGCCGACACCCTCCGCCCCCTCACCCTCCTCTCCGACGCCTGGTGCTCCTCCGGCTCCCTCGCCCCCGACGGCACCCTCCTCCAGACCGGCGGCTTCAACGACGGCTACACCAGGCTCCGCGCCTTCACCCCCTGCCCCGGACGCAACACCTGCGACTGGCGCGAACTCCCCGGCCACAACCTCTCCTCCAGCCGCTGGTACGCCTCCAACCAGATCCTCCCCGACGGCCGAACCATCGTCGTCGGCGGCCGCAACGCCTTCTCCTACGAATTCGTCCCCAAGAGAAACAACGACGCGTCGTTCCAGTATTACCtccccttcttgaaactcacCCGCGACCCCAACCGCGGCGAGGAGAACAATCTTTACCCCTTCTTGCACCTCCTCCCCGACGGCAACCTCTTCATCTTCGCGAACCGAAACTCCATCCTCTTCGACTACGCCCACAACAAGGTCCTCCGAAACTACCCCGCGATCCCCGGGGCAGAAAAAAGAAACTACCCTAGCACCGGCTCCTCCGTTCTCCTCCCGTTAAATCTAACGGGACTCAACGGAACGCGCCTGCCCGATGCGGAGGTTATGGTATGCGGCGGCGCTTACCCTGGCGCGTTTAGCTTGGCCAGCAAGCTGAAAATGTTTGTAGAAGCTTCCAGAACCTGCGGGAGGTTGAGAGTGACGGATTTAAAACCCGAATGGGTGATGGAAGTCATGCCGACCCCGAGGGTGATGCCTGATATGATTTTGCTTCCCAACGGGAATGTGATTATTTTGAACGGTGCGATGAATGGGACTGCGGGTTGGGAGAACGCGGCGAACCCGGTTTTGTCTCCGGTTTTGTATAGACCCGGTTTGGCTGACCCTTCTCCGAGGTTTCAGTTGCTAGCTCCCGCGAGCACTCCCCGGATGTATCACTCGTCCGCCGTGCTGCTGCCAGATGGCAGGGTTTTAGTGGGCGGGAGCAACCCGCACAGGGTGTATGATTTTCGGGCGTATTACCCGACCGAGTTGAGTTTGGACGCGTATTACCCGGATTATATGGGGGCGGAATTTGAGCATTTGCGGCCCTCGATTGTGGCGGTGGAGGCTGCGAATAACACGGCGTCGTATGGGGGGGTGTTTGCGGTGACGTTCTCGCTGAGGGTGTACCGTGAGGGAGGGGTGGGGGTGACGCTGGTGGCGCCGTCGTTTACCACGCACTCGTTTGCGATGAACCAGAGGGTGCTGGTGCTGGATGTGGTGGGGGTTCAGGAGGTGGCGCTGGGGGCTTACAAGGTTGTGGCGCGTGGGGCCCCCTCGCTCGCGGTCGCCCCGCCTGGGTACTACATGCTTTTTATTGTGCACGCGGGGATTCCCAGCGCTGCGGTTTGGGTTCAGGTTAAGTGA 1686 0.5943 MAFKIKNAPSFLLLLTIFFYTAATIQEGTSSTGGHWVQLQRSIGISAMHMQVMIDNKVIIFDRTDFGPSNISLSHHRCRFNPRDLALKLDCTAHSVLYDLAADTLRPLTLLSDAWCSSGSLAPDGTLLQTGGFNDGYTRLRAFTPCPGRNTCDWRELPGHNLSSSRWYASNQILPDGRTIVVGGRNAFSYEFVPKRNNDASFQYYLPFLKLTRDPNRGEENNLYPFLHLLPDGNLFIFANRNSILFDYAHNKVLRNYPAIPGAEKRNYPSTGSSVLLPLNLTGLNGTRLPDAEVMVCGGAYPGAFSLASKLKMFVEASRTCGRLRVTDLKPEWVMEVMPTPRVMPDMILLPNGNVIILNGAMNGTAGWENAANPVLSPVLYRPGLADPSPRFQLLAPASTPRMYHSSAVLLPDGRVLVGGSNPHRVYDFRAYYPTELSLDAYYPDYMGAEFEHLRPSIVAVEAANNTASYGGVFAVTFSLRVYREGGVGVTLVAPSFTTHSFAMNQRVLVLDVVGVQEVALGAYKVVARGAPSLAVAPPGYYMLFIVHAGIPSAAVWVQVK 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1648 561 CDD E_set_GO_C 455 560 IPR015202 -
Ssu2g1648 561 Pfam Glyoxal oxidase N-terminus 48 299 IPR009880 -
Ssu2g1648 561 Gene3D Immunoglobulins 454 561 IPR013783 -
Ssu2g1648 561 Gene3D - 30 451 IPR037293 -
Ssu2g1648 561 PANTHER F14L17.20 PROTEIN 13 560 - -
Ssu2g1648 561 PANTHER SECRETED PROTEIN-RELATED 13 560 - -
Ssu2g1648 561 SUPERFAMILY Galactose oxidase, central domain 81 447 IPR011043 -
Ssu2g1648 561 Pfam Galactose oxidase-like, Early set domain 455 560 IPR015202 -
Ssu2g1648 561 SUPERFAMILY E set domains 452 560 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1648 Ssu-Chr2 65248384 65250069 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1648 - - gmx:100813021 926.006
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1648 2 65248384 65250069 Ssu2g1648 2 65248384 65250069 ECH