Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1639 ATGATACCCCCTGGATCTGTTCCTATAAAGGACTATGCAATAGAGACCCTTTTGAAGAAGTCATCCTTATCTGCTGAAGGAGATGCGCTTCATGAAGTCAGGATTGAACTTAAAGCCGACAATGGAATTTCAGCAATTAATTTTGTTCTCAAGGATGAGGAAACTGGAGCTTGGTATAAAAACGAAAGAAGAGATTTCAAGGTTTCTTTGGTCAACCACCTTAAGGCGGATACTAATATAATTGGACCTAAAAGGGGCTTTGATTTATGGCCAGGGAATTGGGGGCAGATATCTAAAATGTTCCTCAAGTCAAAAGCTGACCAAGATGACAGCAGTGAATCAAGAGTTCCAgaacaagaaaataatcaaCCAGAAGTTTTCTATGAAGAAGTGTCTATAACAAAGAAGGTTTTAGTTAATAACTCTATCAGTGTCTCCACCAAAAAATGCTTTGAGTCTGGGGCAGTTAAggacattttatattttgaaactgaTCTACTTGGAGATGTTGTCCTTCACTGGGGAGTTTGTAGGGATGATTCAAGAAGATGGGAAGTTCCACCTCCTCCTCATCCACCAGGCACAGTACCATTTAAAGACAAGGCTTTGAGAACTCAATTACGGCCAAGTGACGGTGGAAAAGGATCTTCAGCACTAATCACTTTAGAAGAAGAATTTTCAGGATTTATTTTTGTACTTAAGCAAAATGAAAATACTTGGTTCAAGTACATGGGAAATGACTTTTATATCCCCCTCTCAAGTTCTAGTAGCTTGCATAATATTGGCAACATAAAGGATCAGTCAGAAGTTGTGCAGGGGGAAGTGATTGAAGAGGCTAGTCAAGAGACTTCTTTCTTTGCATTTACTGATACAGTAGCCAATGAAATAAGAAATTTGGTCACAGACAATTCCTCTGAGAAGAGTCAAAAGACAAAATCCAAAAAAGCACGACAAAGTATTTTTCAAGAAATTGAAAGACTGGCTGCTGAAGCCTATAATCTATTCAGAAGCTCCATTCCAACTTTCTCAAAGGCAACTACTGCAGAACCAAAAGCAACTATTGTGGAAGCTGAGACAATTATTGTGAAACCTCAGGCAACAACTATTGTGGCACCTGAGACAACTATTGTGAAACCTCAGGCAACAACTATTGTAGCACCTGAGGCTTCAGTGGAATCAGAGACACTGTCCCTGGATCCAAAAATATACTCAGGGACAGGCACAGGGTATGAAATATTATGCCAAGGGTTTAATTGGGAATCTCATAAATCTGGAAGATGGTACGTGGGGCTTAAAGAGATAGTTTCAGAACTAGCATCACTTGGTTTCACTGTGGTCTGGTTACCACCACCTACAGATTCTGTTTCACCTGAAGGATACATGCCAAAggatttatacaatttaaattcCAGataCGGAAACATTGATGAACTGAAAGATTTGGTGAAAAGATTTCATGAAGTTGGGATCAAAGTTCTAGGAGATGCTGTTTTAAATCACCGCTGTGCTCATTATCAGAATCAGAATGGTATTTGGAACATATTTGGAGGCCCTCTTAACTGGGATGATCGTGCAGTTGTTGCTGATGATCCACATTTTCAGGGTACGGGCAACAAGAGTAGTGGAGATAATTTTCATGCTGCTCCAAACATTGATCATTCACAGGAATTTGTGCAAAAGGATCTCAAAGAATGGTTATGCTGGTTAAGGAAAGAAATTGGATATGATGGATGGAGGCTTGACTTTGTCAGAGGATTTTGGGGTGGTTATGTAAAGGACTACATAGAAGCAAgtgaaccttatttttctgtGGGAGAGTACTGGGATTCCCTCAGTTATTCAACTGGTGAAACGGATCATAATCAAGATGCTCATAGGCAGAGGATAGTTGACTGGATCAGTGCCACTAATGGTACCTCTGGTGCATTTGATGTTACGACAAAAGGGATTCTTCACTCTACATTGGAAAGATGTGAATATTGGCGATTGTCAGATGAGATGGGAAAGCCTCCAGGCGTTGTTGGGTGGTGGCCATCTCGTGCTGTTACCTTTATAGAGAATCATGACACTGGTTCCACTCAGGGTCATTGGAGATTTCCCGGTGGAAAAGAAATGCAAGGATATGCTTACATCCTTACTCACCCAGGAACCCCATCAGTGTTTTATGACCACATTTTCTCTCACTATAAAACTGAAATAGCAACTATAATATCTCTCAGGAAGAGGAACAAGATCCACTGCAGGAGTTCAGTTCAAATTAGTAAAGCAGAAAAGGATGTTTATGCAGCCATCATCGATGAAAAAGTTGCTATGAAGATTGGACATGGACATTTTGAACCACCTAGTGGCTCCCACAAATGGTCATTAGCTATTGAGGGAAAAGACTATAAGATTTGGGAAGCATACTAA 2409 0.3927 MIPPGSVPIKDYAIETLLKKSSLSAEGDALHEVRIELKADNGISAINFVLKDEETGAWYKNERRDFKVSLVNHLKADTNIIGPKRGFDLWPGNWGQISKMFLKSKADQDDSSESRVPEQENNQPEVFYEEVSITKKVLVNNSISVSTKKCFESGAVKDILYFETDLLGDVVLHWGVCRDDSRRWEVPPPPHPPGTVPFKDKALRTQLRPSDGGKGSSALITLEEEFSGFIFVLKQNENTWFKYMGNDFYIPLSSSSSLHNIGNIKDQSEVVQGEVIEEASQETSFFAFTDTVANEIRNLVTDNSSEKSQKTKSKKARQSIFQEIERLAAEAYNLFRSSIPTFSKATTAEPKATIVEAETIIVKPQATTIVAPETTIVKPQATTIVAPEASVESETLSLDPKIYSGTGTGYEILCQGFNWESHKSGRWYVGLKEIVSELASLGFTVVWLPPPTDSVSPEGYMPKDLYNLNSRYGNIDELKDLVKRFHEVGIKVLGDAVLNHRCAHYQNQNGIWNIFGGPLNWDDRAVVADDPHFQGTGNKSSGDNFHAAPNIDHSQEFVQKDLKEWLCWLRKEIGYDGWRLDFVRGFWGGYVKDYIEASEPYFSVGEYWDSLSYSTGETDHNQDAHRQRIVDWISATNGTSGAFDVTTKGILHSTLERCEYWRLSDEMGKPPGVVGWWPSRAVTFIENHDTGSTQGHWRFPGGKEMQGYAYILTHPGTPSVFYDHIFSHYKTEIATIISLRKRNKIHCRSSVQISKAEKDVYAAIIDEKVAMKIGHGHFEPPSGSHKWSLAIEGKDYKIWEAY 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1639 802 Gene3D - 745 801 IPR013780 -
Ssu2g1639 802 SMART alpha-amyl_c2 741 801 IPR012850 GO:0004556|GO:0005509|GO:0005975
Ssu2g1639 802 CDD AmyAc_arch_bac_plant_AmyA 412 751 - -
Ssu2g1639 802 PANTHER ALPHA-AMYLASE 3, CHLOROPLASTIC 50 801 - -
Ssu2g1639 802 SUPERFAMILY (Trans)glycosidases 410 728 IPR017853 -
Ssu2g1639 802 SUPERFAMILY Glycosyl hydrolase domain 745 800 - -
Ssu2g1639 802 Gene3D Glycosidases 411 744 - -
Ssu2g1639 802 Pfam Alpha-amylase C-terminal beta-sheet domain 742 800 IPR012850 GO:0004556|GO:0005509|GO:0005975
Ssu2g1639 802 Pfam Alpha amylase, catalytic domain 438 721 IPR006047 GO:0005975
Ssu2g1639 802 SMART aamy 411 746 IPR006047 GO:0005975
Ssu2g1639 802 PANTHER ALPHA-AMYLASE 50 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1639 Ssu-Chr2 65003130 65009266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1639 1 800 Glycoside Hydrolase AT1G69830 61.923 0.0 1017
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1639 K01176 - gmx:100810333 1382.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1639 2 65003130 65009266 Ssu2g1639 2 65003130 65009266 ECH