Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1606 ATGGATTTGGGGGTTTCTGATGAGATGTTAGGCACTTTTGTGCCAATAGTAGTTTACTGGATTTATTCTGGGATTTACGTTGTTCTGGGGTTGTTTGCTGAGAATTATCGGTTACATTCGAAGCAGGAAGAGGATGAAAAGAATTTGGTGTCTAAGGGTGCTGTGGTTAAAGGTGTTCTCCTCCAACAGCTAGTTCAGGCTGTGGTTGCAACCCTCTTGTTTGCGCTGACAGGAAGTGATAGCCAAAATACTACCAGCCAGAATACTTCTCTACTTGTTTTAGCAAGACAATTTGTTACTGGTATGCTTGTAATGGATGCATGGCAATACTTTATGCACAGATACATGCATCACAACAAATTCCTATACAAACATATCCACTCTCTACATCACAGACTCATTGTACCCTATTCGTATGGAGCTCTGTACAATCACCCTGTCGAGGGGCTTCTGAATGACACTATTGGTGGGGCTATATCTTTCCTAGTCTCCGGGATGAGTCCTCGAGCctccatcttcttcttctcttttgccACCATTAAAACAGTGGATGATCACTGTGGGTTACTGCTCCCGGGGAACcttttccatatatttttcaaaaacaactcGGCCTACCATGATGTGCACCATCAGCTCTATGGCAACAAGTACAACTTCTCGCAACCATTCTTCATCATGTGGGACAAAATCTTGGGTACCTATATGCCATACACATTGGAGGAGAGGGCAGGTGGCGGTTTTGAAACTAGACCTTGCAAAGATTACAAGGATGATTAA 780 0.409 MDLGVSDEMLGTFVPIVVYWIYSGIYVVLGLFAENYRLHSKQEEDEKNLVSKGAVVKGVLLQQLVQAVVATLLFALTGSDSQNTTSQNTSLLVLARQFVTGMLVMDAWQYFMHRYMHHNKFLYKHIHSLHHRLIVPYSYGALYNHPVEGLLNDTIGGAISFLVSGMSPRASIFFFSFATIKTVDDHCGLLLPGNLFHIFFKNNSAYHDVHHQLYGNKYNFSQPFFIMWDKILGTYMPYTLEERAGGGFETRPCKDYKDD 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1606 259 Pfam Fatty acid hydroxylase 98 234 IPR006694 GO:0005506|GO:0008610|GO:0016491
Ssu2g1606 259 PANTHER STEROL DESATURASE 1 258 - -
Ssu2g1606 259 PANTHER BNACNNG58690D PROTEIN 1 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1606 Ssu-Chr2 64262415 64264715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1606 1 259 Acyl Lipid Metabolism Gene Families AT1G69640 78.378 6.35e-145 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1606 K04713 - gmx:100778076 498.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1606 2 64262415 64264715 Ssu2g1606 2 64262415 64264715 ECH