Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1605 ATGGTTATCTTAGCAGCCACTTCCAACAACATCCATCAGTTGCAAACTTTCCACTCTCCGAATAACAACTACCACCTCCGCGATGCTTCCTTCTCTTCATACTTGAACAACAAAGAAGAGATCCTGGCTGAATCAGGCCATGGCTTTATCAGCAACAGAAAGGAGCCTCTGGGAGTAAAGAAGGAAGATGATGGAGAAATTGGAGTGTTTGAAGCTGAAAAGTACTTCAACGGAGAAGAGACGGAAAGCCCCCCAAGAGTTGCTAACAATGATGCAAACAAGCACCAGCAACAGCACCAGAAGGATGAACAAACAGCACTAGTAACTAGTAAGTACAAAGTCCAGTATGGAACTCCAAGCGTTCGGTCTGAGTCAAGTTTGAACAGCCAAAATGCACTGTTACAAGGTGCTGTGAGGAATTCCTCAAGGAACATGAAAAACAAACTGCAGAGAAAGAGTTTTCTAGCCGGTCTTGGTTGCAAATGCTATTGTTCTGACAAGAATTCTGTTGATATTAGTGACCATGCAGGTGAAATCAGTTTTAACAAAAATGCTACTCATGGAAAAACATCTTCAAGAAGTATCTTCAATGCTGATCCAGATGCTAATCATTCAGGCAAAATGACTAAGCCTCATGCAGAACTCTTGATCAACAAAGGTGTCTACTTCCAAAGGCCAGAGAAGTTAGGGGTGGGATTGAGCAGAGAAAACAGTTTAGCATTCTCAGCTGTGAATCCTAGCTCAGGAAATCAACTGGTCAAAATGCAACTTCAACAAGTAGAGAAGCCAAGGAACTCATTGGAAGTGTTTGGCTCCCCAATATTGGATAGCAGGAGCAAGTCCTTGAGCTTTGATAAAAGGTTGGCAAAGACATCTTGGGATGCTCCTCCTAAAATTGAAGAAACTGACTTCTCAGCAAATTCTGGTGGAAACTACAATGATGCTGAGAGTGATGCAAGTTCAGACTTATTTGAGATTGAAAGCCTCACAGGCAAATCCAACTCCTTCCTTGCTAGATCAACATCCAATGTTGTTTCCACCTGTGCCAGCCCCACAACTTGTTATGCACCAAGTGAGGCAAGCATAGAATGGAGTGTGGTCACTGCCAGTGCCTTAGAGTACTCAGCCATGTCAGATTATGATGATCAGAGGTCAATAGCAACCACAAGGAGTCCAATTAGGACATCCTTAGTTTCCTCAAATGACAAACCAAAAGTCACCAAAGAGATGCATAGGCGGCGTCCTAGCATGATGTTAGGTTGCAAGAGCCAGAAAGCTGTAGGAGTTGCTGTAGATGCCTTCACAGCATATGAGAAAGCAAGTTCTAACACGCTTACTCCTCGCAGGTCAGACACCTTCCCTCATGTGACAGAGTTTAAGACACAGACAAAGGAGGGAAGTTTTGGTGCAAGACATAAGCAACATGCTTATGCCACACCCCCACTTCAGCGATCAATCTCACCACATCCTTCACAACTCTTGTACATTTAG 1491 0.4366 MVILAATSNNIHQLQTFHSPNNNYHLRDASFSSYLNNKEEILAESGHGFISNRKEPLGVKKEDDGEIGVFEAEKYFNGEETESPPRVANNDANKHQQQHQKDEQTALVTSKYKVQYGTPSVRSESSLNSQNALLQGAVRNSSRNMKNKLQRKSFLAGLGCKCYCSDKNSVDISDHAGEISFNKNATHGKTSSRSIFNADPDANHSGKMTKPHAELLINKGVYFQRPEKLGVGLSRENSLAFSAVNPSSGNQLVKMQLQQVEKPRNSLEVFGSPILDSRSKSLSFDKRLAKTSWDAPPKIEETDFSANSGGNYNDAESDASSDLFEIESLTGKSNSFLARSTSNVVSTCASPTTCYAPSEASIEWSVVTASALEYSAMSDYDDQRSIATTRSPIRTSLVSSNDKPKVTKEMHRRRPSMMLGCKSQKAVGVAVDAFTAYEKASSNTLTPRRSDTFPHVTEFKTQTKEGSFGARHKQHAYATPPLQRSISPHPSQLLYI 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1605 496 PANTHER PROTEIN PHYTOCHROME KINASE SUBSTRATE 1 7 468 - -
Ssu2g1605 496 MobiDBLite consensus disorder prediction 76 105 - -
Ssu2g1605 496 PANTHER PROTEIN PHYTOCHROME KINASE SUBSTRATE 1-RELATED 7 468 IPR039615 GO:0009638
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1605 Ssu-Chr2 64243510 64245000 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1605 - - gmx:100811572 828.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1605 2 64243510 64245000 Ssu2g1605 2 64243510 64245000 ECH