Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1604 ATGGCAAAACCAAGTTCAGCTGATGGTAGGACTAGAAGCCATGTGCAGATCTTTATAGTAGTTGGTCTGTGCTGTTTCTTCTATATATTGGGTGCATGGCAGAGAAGTGGTTTTGGAAAGGGAGATAGCATCGCATTGGAGATTACTAAGAAAGATGCAGGCTGTAATGTAGTTCCCAATTTGAGTTTTGACTCTCACCATGGTGGAGAAGTTAGCAAAATTGATGAATTTGAGTCAAAACCCAAAGTGTTTGAACCTTGCGATGCTCGTTACATCGACTACACTCCCTGCCAAGATCAACGGCGTGCCATGACTTTTCCTAGAGAAAATATGAATTATCGCGAGAGGCATTGCCCCCCTGAGGAAGAAAAGTTACACTGTTTGATCCCAGCACCCAAGGGGTATGTAACTCCATTTCCATGGCCGAAGAGCCGTGATTATGTTCCATATGCAAATGCACCGTACAAGAGTCTTACGGTTGAGAAGGCTATTCAGAACTGGATCCAATATGAGGGAAATGTGTTTAGATTCCCTGGTGGTGGAACCCAATTTCCGCAAGGTGCAGACAAATATATTGACCAGCTTGCTTCTGTGATACCTATAAAGGATGGGACAGTTAGGACAGCACTGGACACTGGTTGCGGGGTTGCCAGTTGGGGTGCATATCTCTGGAGCAGAAATGTTATTGCCATGTCCTTTGCACCAAGGGACTCTCATGAAGCACAAGTACAGTTTGCTCTTGAAAGAGGTGTACCTGCTGTCATTGGTGTTCTGGGAACCATAAAATTGCCTTATCCATCTGCAGCCTTTGACATGGCACATTGCTCTCGCTGCTTGATTCCTTGGGGAGCTAATGATGGAATGTATATGATGGAAGTTGACCGAGTTCTAAGGCCTGGTGGTTATTGGGTGCTTTCGGGTCCTCCAATCAATTGGAAGGTTAACTACAAAGCCTGGCAGAGACCTAAGGAGGATCTTGAAGAAGAACAAAGAAAGATTGAAGAGATTGCTAAGCTCCTTTGCTGGGAGAAGAAGTCTGAGAAGTCTGAAATTGCCATTTGGCAAAAAACTGTAGACTCTGAATCATGTCGTAGCAGACAAGAAGATTCTAGTGTAAAATTCTGTGAATCGACAGATGCTAATGATGTCTGGTATAAGAAAATGGAGGTCTGCATTACTCCGAGTCCTAAAGTTTCTGGTGATGTTAAGCCATTTCCAGATAGGCTATATGCCATCCCTCCTAGAATTGCTGGTGGTTCGGTTCCTGGGGTTTCAGTTGAGACATACCAAGATGATAACAAAAAGTGGAAAAAGCATGTAAAtgcttataagaaaattaacagACTCCTGGATTCTGGTAGGTATCGCAACATTATGGATATGAATGCTGGATTGGGTAGTTTTGCTGCTGCTATTCAATCAACCAAGTTATGGGTCATGAATGTTGTGCCTACTACAGCCGAGAAAAGTACACTAGGTGTCATATATGAGCGAGGACTTATTGGCATCTATCATGATTGGTGTGAAGCCTTCTCCACATACCCAAGGACATACGACCTCATTCATAGCCATGGTCTCTTTAGTTTGTATAATGACAAATGTAATATAGAAGACATTCTTTTGGAGATGGACCGGATTTTACGCCCAGAAGGTGCTGTAATATTCCGTGATGAAGTCGATGTCTTAATTAAGGTAAAGAAATTAGTTGAAGGAATGAGATGGGATACCAAAATGGTTGACCATGAGGATGGTCCACTTGTTCCTGAGAAGATACTAATTGCTGTCAAGCAGTATTGGGTTACAAATGCCACATCTACACAATAA 1824 0.4254 MAKPSSADGRTRSHVQIFIVVGLCCFFYILGAWQRSGFGKGDSIALEITKKDAGCNVVPNLSFDSHHGGEVSKIDEFESKPKVFEPCDARYIDYTPCQDQRRAMTFPRENMNYRERHCPPEEEKLHCLIPAPKGYVTPFPWPKSRDYVPYANAPYKSLTVEKAIQNWIQYEGNVFRFPGGGTQFPQGADKYIDQLASVIPIKDGTVRTALDTGCGVASWGAYLWSRNVIAMSFAPRDSHEAQVQFALERGVPAVIGVLGTIKLPYPSAAFDMAHCSRCLIPWGANDGMYMMEVDRVLRPGGYWVLSGPPINWKVNYKAWQRPKEDLEEEQRKIEEIAKLLCWEKKSEKSEIAIWQKTVDSESCRSRQEDSSVKFCESTDANDVWYKKMEVCITPSPKVSGDVKPFPDRLYAIPPRIAGGSVPGVSVETYQDDNKKWKKHVNAYKKINRLLDSGRYRNIMDMNAGLGSFAAAIQSTKLWVMNVVPTTAEKSTLGVIYERGLIGIYHDWCEAFSTYPRTYDLIHSHGLFSLYNDKCNIEDILLEMDRILRPEGAVIFRDEVDVLIKVKKLVEGMRWDTKMVDHEDGPLVPEKILIAVKQYWVTNATSTQ 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1604 607 PANTHER METHYLTRANSFERASE PMT2-RELATED 5 603 - -
Ssu2g1604 607 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 5 603 IPR004159 GO:0008168
Ssu2g1604 607 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 93 596 IPR004159 GO:0008168
Ssu2g1604 607 Gene3D Vaccinia Virus protein VP39 161 377 IPR029063 -
Ssu2g1604 607 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 442 558 IPR029063 -
Ssu2g1604 607 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 321 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1604 Ssu-Chr2 64235801 64239352 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1604 - - gmx:100778611 1217.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1604 2 64235801 64239352 Ssu2g1604 2 64235801 64239352 ECH