Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1574 ATGAATCTTCATTGTGCTTCTTCTCTTGCTGCAACGGTATCATCGGTTCCCTTATCACTCAAAGCTCCGGTTTGCTCCATCAATGAAGCCACCCACAAGTCTCGCACGCTTCAGAAACGGGTCAACTCGGACGCGCCAAACAAACTCAGCACCGAGTTTCTGTCTCCTGACTCGCCGGAACCCACCACCAAACCATGCTTCTGTGGAAGAAGACACTTCATCGAAGCTGCAACAGTGGGAACTACCCTGTTCCCAATTCGACCCTCCAGAGCCACCGACCCACCTTGTGATTACACAGCTTTGCTTAACAAGTTTCACCCACGAAGACCTGATTGGTACGAGGAGTTCTATGCTTCGGTTATGAATTCAGCTACTAAGGCGTATGAAGCTGAGGTTGCAAAGTACAAGTCTCAAATCTTCAGTAACTTGAAGGGGAAGGGTCTAAGAATCTTGGAGATTGGCATTGGAACTGGTCCCAATCTCAGTTATTATGCTAGTGGTTCTGATGTAGAGGTTGTTGGCATTGATCCAAACgtgaaaatggaaaaatatgcTCGGTCCTCAGCTGCGTCGGCTGGACTGCCTTCTTCAAATTTTGAGTTTATACAAGCTGTCGGGGAGGCTATACCATTAAGTGATGCTTCTGTTGATGCAGTTGTTGGAACACTTGTATTGTGTTCTGTTGAAGATGTTGATATGACACTGAAAGAAGTGAGGAGGGTGCTGCGACCTGGTGGACTTTATGTGTTTGTAGAACATGTGGCTGCGAAAGATGGAacttttctcaaatttataCAGAGAGTTCTTGATCCTCTTCAACAGACACTTGCAGATGGGTGTCACCTTTCTAGGGAAACCGGAAACTATATATCCAGGGCTGGATTTTCAAGTGTTGAGCTTAACTTGGCATCCTTGTCTAGTGCTGCATTTATAAACCCCCATGCATATGGAATAGCTTACAAGTAG 966 0.4472 MNLHCASSLAATVSSVPLSLKAPVCSINEATHKSRTLQKRVNSDAPNKLSTEFLSPDSPEPTTKPCFCGRRHFIEAATVGTTLFPIRPSRATDPPCDYTALLNKFHPRRPDWYEEFYASVMNSATKAYEAEVAKYKSQIFSNLKGKGLRILEIGIGTGPNLSYYASGSDVEVVGIDPNVKMEKYARSSAASAGLPSSNFEFIQAVGEAIPLSDASVDAVVGTLVLCSVEDVDMTLKEVRRVLRPGGLYVFVEHVAAKDGTFLKFIQRVLDPLQQTLADGCHLSRETGNYISRAGFSSVELNLASLSSAAFINPHAYGIAYK 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1574 321 Pfam Methyltransferase domain 151 250 IPR013216 GO:0008168
Ssu2g1574 321 Gene3D Vaccinia Virus protein VP39 114 310 IPR029063 -
Ssu2g1574 321 MobiDBLite consensus disorder prediction 40 58 - -
Ssu2g1574 321 PANTHER METHYLTRANSFERASE LIKE 7B 59 320 - -
Ssu2g1574 321 CDD AdoMet_MTases 149 251 - -
Ssu2g1574 321 MobiDBLite consensus disorder prediction 36 61 - -
Ssu2g1574 321 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 300 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1574 Ssu-Chr2 63410496 63413533 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1574 147 298 Acyl Lipid Metabolism Gene Families AT1G48600 27.389 2.79e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1574 - - gmx:100786271 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1574 2 63410496 63413533 Ssu2g1574 2 63410496 63413533 ECH