Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1570 ATGTCCAGCTTCACTCACGCCACTACACTGCTCCATGCTCACATCAAAACCAAGCACCAAAAAGCCTCCAAGGCCAACACCCCTTTGCCCCTCAGCCAGTCACCCTTCTCCGCGGAGCAAAATGTGACCAGCAGAAGGAAGCTGATTTCAACGTTTCTGGCCACTTCAACGGCAGTGCTGGGTTGCAGCACTGCCACAACACCAGCACTGGCCCAGAACTGGGGCACTCGGTCCTTCATCAAGGAGCATTTCTTCGGGCCAGGGCTTTCCCCCGAAGACGCAGTGGCGAGAATAAAGCAAACTGCTGAGGGGCTGCATAGCATTAGGGAGATGTTGGAAACTATGTCTTGGAGGTATATCATGTTCTACATACGCATAAAACAGGCCTATCTTGATCAGGATTTGAGAACTGCTTTCTCCACCTTGCCTGAAAATCGCCGCAAGGAGTATGTCAAAACTGCTAATGAGTTGGTGTCCAACATGGGTGAGTTTGATCGGCATATTCGGACGCCGAAGGTGTATGAATCGTACCTATACTACGAGAAGACATTGAAGTCAATAGATGAACTTGTGGCCATACTAGCATAG 588 0.5 MSSFTHATTLLHAHIKTKHQKASKANTPLPLSQSPFSAEQNVTSRRKLISTFLATSTAVLGCSTATTPALAQNWGTRSFIKEHFFGPGLSPEDAVARIKQTAEGLHSIREMLETMSWRYIMFYIRIKQAYLDQDLRTAFSTLPENRRKEYVKTANELVSNMGEFDRHIRTPKVYESYLYYEKTLKSIDELVAILA 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1570 195 Gene3D - 53 194 IPR023222 -
Ssu2g1570 195 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 2, CHLOROPLASTIC 1 195 - -
Ssu2g1570 195 SUPERFAMILY Oxygen-evolving enhancer protein 3, 84 195 IPR023222 -
Ssu2g1570 195 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 1 195 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Ssu2g1570 195 MobiDBLite consensus disorder prediction 15 36 - -
Ssu2g1570 195 MobiDBLite consensus disorder prediction 22 36 - -
Ssu2g1570 195 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 66 195 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1570 K08901 - gmx:100807480 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1570 2 63386591 63388119 Ssu2g1570 2 63386591 63388119 ECH