Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1567 ATGTATTCTTCACGAGGGAGCGGCGGTTACGGCCAATCGTACACGGGTCAATCCGCATATGGCCAGAACCTTGGTGCTAATTATTCTGGGAGTTCTGTTGGAGGACATGATGTGGGTCAGCATTCTGTGGCTTCTAGGCATTCGACAATATTAGGTGGTTCTCAGGAGGTTGAAGTTGGTGGGTATAGGGCTCATACTTCCACTGCCCCGCAGTACGGGGGACAGTATAGTTCTGTTTATGGATCAGCTGCTCTGAGCAGTGCACAGCAGgtCCCTTCGTTGAGTACCAAGGTTTCTGCATCATCAGCTTTAGATGGTCGTGGAGGTTATGCTTTGGGTGTCTCTGATTCACCTAAGTTTACTTCCGGAGATTATGTTTCATCCTCAAGCCATGGATATGGTCACAAATCTGATCAATTGTATGGTGACAAGGGTTTGGAGTATTCTGGAATAGACAGGAGGCAATATGGTGAACGGCAGAGTGGTTATGTTGGTAGGGACTTAACAAGTGATCCAACTGGAAGATATGCTGCTGATCCTATTGGATTTAGTCATCAACGTCAGCAATCAGAAATATATGACCGCATTGATCAGGCAGCTTTGCTTCGACAAGAGCAATTGCTGAAAGCTCAGTCTCTGCAAGCTGCATCACTTGATGGGGGTActagACAAGCTGATTATCTTGCAGCAAGGGCTGCTGCTAGTCGTCACCTCACCCAAGATCTTGTGTCTTATGGAGGAAGGATGGATTCTGATCCCCGTGGTTCATCCATGCTAAGTGCTACTTCATATAGTGGACAACATGCGCCATCAATATTAGGAGCAGCACCAAGGAGAAATGTGGATGATCTCTTGTATTCTCAGAATGCTTCAAATCCTGGTTATGGAGTGAGCCTACCTCCTGGTAGGGACTATGCTAGTGGGAAAGGTCTTCATGGGAATGCCATGGAGTTGGACTACCCAGGAAATGTGCTGTCACATGGTGGGCATACTGATCGCAAGGATGATCGAGCTAGCTATCTACGAGAATTTGAGCTAAGGGAAGAAGAGCGTCGCCGGGAGCGCTTGCGTGAGAGAGAGAGGGAcagagaaaaggagaaagaaagggaACGATTGCGAGAACGGGATCGAGAAAGGGAACGTGAAAGGGAACGCATTTTGGAGCGGCGCGAGAAGGAGAGGGAGCGAGAGCGCAAACGTGCACTTGAAACTAGACATGAACGAACTCCAGCGAGATCCTCCAAGGATCCCCGTGGTACTTCAAAAGATCCTCGTGGGTCGTCTTTGACAAAGGAGGGGAGATCTTCACGACGGGACTCCCCACATCATGGTGCTTTACATAGGCACCATTCACCTGTTAAAGAAAAACGGAGAGAATATGTCTGCAAGGTATACCCATCCCGCTTGGTAGATATTGAGAGGGATTACCTCTTAATAGATAAGCGATACCCGCGACTCTTCGTCTCTCCTGAATTCACCAAGGTGGTTGTGAACTGGCCTAAGGAAAACCTTAAACTGTCTATTCATACTCCTGTCAGTTTTGAGCATGATTTTGTTGAAGAAGAAAGTGCCACTGAGCCTAGAGACTCATCCAACAAGCTTTTGGTGGGACAACCTCCAAATTCAGAACAAGGAAATACAGTTTGGAATGCCAAAATAATCTTGATGAATGGACTTAGTAGGTCTGCATTGGAGGAGCTGCCATCtgataaaattgttgatgaTCGCATTCCTCATATTTGCAATTTCCTTAGATTTGCGGTTCTTAAGAAGGACCATTCTTTCATGGCAGTTGGTGGTCCATGGGAAGCTGTTGATGGGGGTGATCCATCTAGTGACGATAACTCTTTAATCAAAACCGCCCTCAGATATGCAAAGGATGTCATTCAACTTGACTTGCAGAATTGTCAACACTGGAATCGTTTTCTTGAGATACATTATGATAGAATTGGTAAAGATGGTTTCTTTAGCCACAAGGAAATCACTGTTCTTTATGTTCCCGATTTGTCTGACTGCCTCCCTTCATTGGATGAATGGCGTGACAAGTGGCTTGCCCACAAGAAAGCTGTGACTGAAAGAGAACATCaactttctttgaaaaaagaGAAATCAAGAGATAACAAGGAAGTATCCAAAGataaATCAGATAAAAGGAAGGATTCTGCTCCATCGGGACAGTCAGATgtcaagaaaaaagagaaagatagtaATACTGTTAAGGAAGAAATTGATGGAAAAACTGGGGTGATTAACaataaaattgccaaaaatGAAGGTTCTGACATTGGTGAAGAAGGCAAGAGTGCTGAGAAAAAGCAGGGGGAATCTGCCACTGGTCAAACCACAGGCGGTGtgaagtctgtgaaaaagaagATTATAAAGAAGGTTGTGAAACAGAAAGTTGCCATTAAGGCAAATGCTTCTGCCACGAAACAAACGGACAAATCAGGTGAAAAGGACGTAGCTGAGCAAGTGACAACATCCAATGTTACTTATCAGGATGATAAATCTTCTGTGGATCCTACTGGGGTTCAAACTTCCATAAAAAACTTAGTTGCTGATGATATGTCTGTTGGGAAAACTGAAGGTGAAGAGGGAAAacataaggaaataaataattttgaagataaaccTCAAAACCAGCCAGATCCAACAGTAAATGCAGTTGTGAGTGATTCTGCTGtgaaaacaacaaagaaaaagaaaattattaagcGGGTACCTAAGAAGAAGGTGGTGGGTGAGGCTTCTAAATCTCTAGTTTCTGAACCTAAAAAGGATGACGGGAATAATCAAGCACAAGATGGTACCCAGAGCTCTGGCAAGCAGATGGCAGATGCAGATGCAAATACTGTAGTCACTGAGGCAAAGAAACCTGTGAAGGTTGTTCctaagaaaaagttaaaaacaccTTCCTCTAAGAAGCAAGAAGAAACAATGTCCGACAACAAGGATGAAGGGAATGTTGTGGCAGTTCAAGCACAAGATGACACACAGAGCACTGGCAAGCAGACTGCAAATGCAGATACCATAGTGACGACAGAGGTGAAGAAAACTGGGAAGGTTATCCCTATAAAACAATCAAAGGCCCCCCGTCTGAAAAGCCAGACAATGCTGCTGATTCCAGTAAAACAGAAACAAAGTCTGACAAAGATgacaaaaaggaagaaagaggaACTGGTGAAAAAAGTGGAGCAAAGACAGACAAGCAGAAAGCCTCTGATAAAGATGTTAACAATGTAA 3243 0.4194 MYSSRGSGGYGQSYTGQSAYGQNLGANYSGSSVGGHDVGQHSVASRHSTILGGSQEVEVGGYRAHTSTAPQYGGQYSSVYGSAALSSAQQVPSLSTKVSASSALDGRGGYALGVSDSPKFTSGDYVSSSSHGYGHKSDQLYGDKGLEYSGIDRRQYGERQSGYVGRDLTSDPTGRYAADPIGFSHQRQQSEIYDRIDQAALLRQEQLLKAQSLQAASLDGGTRQADYLAARAAASRHLTQDLVSYGGRMDSDPRGSSMLSATSYSGQHAPSILGAAPRRNVDDLLYSQNASNPGYGVSLPPGRDYASGKGLHGNAMELDYPGNVLSHGGHTDRKDDRASYLREFELREEERRRERLRERERDREKEKERERLRERDRERERERERILERREKERERERKRALETRHERTPARSSKDPRGTSKDPRGSSLTKEGRSSRRDSPHHGALHRHHSPVKEKRREYVCKVYPSRLVDIERDYLLIDKRYPRLFVSPEFTKVVVNWPKENLKLSIHTPVSFEHDFVEEESATEPRDSSNKLLVGQPPNSEQGNTVWNAKIILMNGLSRSALEELPSDKIVDDRIPHICNFLRFAVLKKDHSFMAVGGPWEAVDGGDPSSDDNSLIKTALRYAKDVIQLDLQNCQHWNRFLEIHYDRIGKDGFFSHKEITVLYVPDLSDCLPSLDEWRDKWLAHKKAVTEREHQLSLKKEKSRDNKEVSKDKSDKRKDSAPSGQSDVKKKEKDSNTVKEEIDGKTGVINNKIAKNEGSDIGEEGKSAEKKQGESATGQTTGGVKSVKKKIIKKVVKQKVAIKANASATKQTDKSGEKDVAEQVTTSNVTYQDDKSSVDPTGVQTSIKNLVADDMSVGKTEGEEGKHKEINNFEDKPQNQPDPTVNAVVSDSAVKTTKKKKIIKRVPKKKVVGEASKSLVSEPKKDDGNNQAQDGTQSSGKQMADADANTVVTEAKKPVKVVPKKKLKTPSSKKQEETMSDNKDEGNVVAVQAQDDTQSTGKQTANADTIVTTEVKKTGKVIPIKQSKAPRLKSQTMLLIPVKQKQSLTKMTKRKKEELVKKVEQRQTSRKPLIKMLTM 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1567 1080 MobiDBLite consensus disorder prediction 1046 1080 - -
Ssu2g1567 1080 MobiDBLite consensus disorder prediction 1052 1070 - -
Ssu2g1567 1080 MobiDBLite consensus disorder prediction 970 984 - -
Ssu2g1567 1080 Pfam BURAN domain 472 558 IPR045354 -
Ssu2g1567 1080 MobiDBLite consensus disorder prediction 348 456 - -
Ssu2g1567 1080 MobiDBLite consensus disorder prediction 877 894 - -
Ssu2g1567 1080 MobiDBLite consensus disorder prediction 804 988 - -
Ssu2g1567 1080 MobiDBLite consensus disorder prediction 858 876 - -
Ssu2g1567 1080 PANTHER CCAR1 HOMOLOG 1 819 - -
Ssu2g1567 1080 MobiDBLite consensus disorder prediction 822 852 - -
Ssu2g1567 1080 Pfam DBC1 579 696 IPR025954 -
Ssu2g1567 1080 MobiDBLite consensus disorder prediction 931 947 - -
Ssu2g1567 1080 PANTHER CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN 1 819 IPR025224 GO:0006355
Ssu2g1567 1080 MobiDBLite consensus disorder prediction 519 542 - -
Ssu2g1567 1080 SMART DBC1_2 577 702 IPR025954 -
Ssu2g1567 1080 MobiDBLite consensus disorder prediction 348 440 - -
Ssu2g1567 1080 Coils Coil 346 407 - -
Ssu2g1567 1080 MobiDBLite consensus disorder prediction 758 772 - -
Ssu2g1567 1080 MobiDBLite consensus disorder prediction 694 742 - -
Ssu2g1567 1080 MobiDBLite consensus disorder prediction 694 789 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1567 401 813 EF-hand Containing Proteins AT2G03150 51.174 6.65e-119 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1567 K25827 - gmx:100790366 1030.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1567 2 63321137 63329119 Ssu2g1567 2 63321137 63329119 ECH