Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1549 ATGAGGAGGCATGGGTGGCAGCTACCTTATCATCCTCTCCAGgtGGTGGCTATTGCTGTGTTTTTGGCTCTGGGGTTTGCCTTTTATGTGTTCTTTGTTCCCTTTGTTGGGAAGAAGGTGTATCAGTATGTTGTTATGGGCCTCTACACACCCCTGATTACTTGTGTCTTTGGACTGTACGTTTGGTGTGCAGCATCTGATCCTGCAGATCCTGGGGTTTTCAAGtccaaaaaatatcttaaaattctaGATAACAAAAAGCTTGATGGACTCAAGGGTTCTAAACTAGGAGGGGAATCAACCTCGTCAATGCATGATGGAAATGCTTCAACTGTTGGACCAAAATCGGTCGATAAGGAAGAATTGGGAACTGAAGCAAGTTTAAAAGATGCTGCTATTTCTACAGAGAAGAAAACTGCATCATCACCTTCTTCGTCCTGTCTCCTATTGGTTTGCTCTCCATGTGCTTATATCCATGGCTGCTCAAGTTCAAGTAAGGAATCTTCTGATCAACAAGCAAGTGAAGATGGCATGTTCTATTGCAGTTTGTGTGAAGTTGAGGTCTTCAAGTACAGCAAGCACTGTAGAGTTTGTGACAAGTGTGTTGATCGCTTTGATCATCATTGCAGATGGCTCAACAACTGTATTGGGAAAAGGAACTACAGAAAATTTTTCACCCTTATGGTAGCTGCTCTTGTCTTGCTTATTCTTCAGTGGTTGACTGGGATACTTGTGCTTATCTGCTGTTTTAttgagaagaagaaattttctgTGGATATTTCCTCCAAGTTAGGAAGCAGTTTCTCTCTGGTTCCCTTCGTTATTGTGGTGGTGGTCTGCACCATTTTGGCTATGATTGCTACCTTACCCCTTGCTCAGCTGTTCTTCTTTCATATTCTTCTCATTAAAAAGGGAATCAGCACATATGATTATATCATAGCTTTGAGGGAGCAGGAGCAGGAGCAGCAAGGTATTGGAGGTCAGCAGAGTCCCCAAATGTCACCTGTTAGCTCGCTTACTGGATTGAGCAGTGCAAGCTCCTTTACTACTTTTCATCGTGGTGCGTGGTGCACACCCCCACGTCTGTTCCTTGAAGATCAGTTTGATGTGGTGCCCCCAGAAACAGCTTCTGTAAGCTCACTGGGAAAGAAGACAATAAGAGATGAGCCAGTTAAGAAAAAGAATCCTGGAGCAGTCAAAATTAGTCCATGGACACTGGCACGGTTGAATGCAGAAGAGGTTTCCAAGGCTGCTGCAGAAGCaaggaaaaaatcaaaaattctTCAGCCTGTGACCAGACATCATACTAATGAGCCTTTCAGGCTGGAACCAGACCGCAACTCTGGCAGCAGTGGCCGACGAATGAGCCCCAGGATTGATAACAACAGAAGACGGGCAGGTAAACGCATTCGCTTGCCTGCCGACTTGCCTATGGAGGCCATATCAAAATTTTCTGCTAGCAACGTCGATAAAGGCTTCAGTGGAACATCTAGTTTGGCGCCTCTCCAGCTCGAAGCACGTAGCGTATTTCAAACAAGTCAAGCAGTGTCAAGCTCAGCTGGGATTGTTGCTTCTTCTCCCGAAAGCAGTTTAGACTCACCTGACATTCACCCGTTTCGTGTGTCTTCAACAGATGCCGAAGAAGCAAGAAGGCTTGCAGGTCTTTCTGCCATTGGCGCCGCGAACCTGAAGGGAATCCCTCTGTCAAGGTCAACTAGTGATGGGTATGAGGCCTCTGGTGGGGAAGATAGTGACAGGGTTCCCACCAGGATTGTTCAGAGGTCCACAAATTGGACTAATCTGGTCTTCAGTGCTGATCAGGAGAGAGCTTTTGAGCCAAAATCATCATCCAGCCTGGTTCATAGTAGAAAGTTGTGA 1878 0.4468 MRRHGWQLPYHPLQVVAIAVFLALGFAFYVFFVPFVGKKVYQYVVMGLYTPLITCVFGLYVWCAASDPADPGVFKSKKYLKILDNKKLDGLKGSKLGGESTSSMHDGNASTVGPKSVDKEELGTEASLKDAAISTEKKTASSPSSSCLLLVCSPCAYIHGCSSSSKESSDQQASEDGMFYCSLCEVEVFKYSKHCRVCDKCVDRFDHHCRWLNNCIGKRNYRKFFTLMVAALVLLILQWLTGILVLICCFIEKKKFSVDISSKLGSSFSLVPFVIVVVVCTILAMIATLPLAQLFFFHILLIKKGISTYDYIIALREQEQEQQGIGGQQSPQMSPVSSLTGLSSASSFTTFHRGAWCTPPRLFLEDQFDVVPPETASVSSLGKKTIRDEPVKKKNPGAVKISPWTLARLNAEEVSKAAAEARKKSKILQPVTRHHTNEPFRLEPDRNSGSSGRRMSPRIDNNRRRAGKRIRLPADLPMEAISKFSASNVDKGFSGTSSLAPLQLEARSVFQTSQAVSSSAGIVASSPESSLDSPDIHPFRVSSTDAEEARRLAGLSAIGAANLKGIPLSRSTSDGYEASGGEDSDRVPTRIVQRSTNWTNLVFSADQERAFEPKSSSSLVHSRKL 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1549 625 MobiDBLite consensus disorder prediction 94 122 - -
Ssu2g1549 625 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 8 525 - -
Ssu2g1549 625 MobiDBLite consensus disorder prediction 569 591 - -
Ssu2g1549 625 PANTHER S-ACYLTRANSFERASE 8 525 - -
Ssu2g1549 625 MobiDBLite consensus disorder prediction 96 110 - -
Ssu2g1549 625 ProSiteProfiles DHHC domain profile. 179 229 - -
Ssu2g1549 625 Pfam DHHC palmitoyltransferase 179 312 IPR001594 GO:0016409
Ssu2g1549 625 MobiDBLite consensus disorder prediction 421 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1549 Ssu-Chr2 62784666 62790332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1549 167 222 Lipid Metabolism Gene Families AT4G22750 41.071 7.81e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1549 K20027 - gmx:100790525 1036.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1549 2 62784666 62790332 Ssu2g1549 2 62784666 62790332 ECH