Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1425 ATGCTCTACAACAAGGTTATTTTTGAGGATTCAGAGCTAGAGAAGAATAGGAAGGAGAGGCCATATGGTAAGATAAGATATGTAGCGTTAATCAAAGCTGAGACTCTGAAGGGTTTGATCATTGGAGGGGTCCAGACTGAGAAATTCAAAggtttgttaaatgatggcatCAAGGGTGACAAACTCAGATTTCTCATGCTTGCTCGGAAGAGATCATCACAGTTGAAGCTTTGGACACTTCGAGTTGCAATTCTGATGCTGCTTTGGATCGTTGTAATGCAATTCAAAGGCCTTGGTGACATGGTAACACCTGCCATGTTCAAGACTCGCTCTGTCTTCTCTCGACCATCTCAAAGGATTTACGAGAATAATAATGGGTATCTAATGGTTTCTTCCAATGGAGGATTGAATCAAATGCGAGCTGGAATATGTGACATGGTTACCATTGCAAGATATTTAAATGTTACACTAATAGTTCCTGAGCTGGATAATACCTCTTTTTGGAATGATCGTAGCCAATTCCAAGATATATTCGATGCGGATTATTTCATCAGTTCTTTGAGAGATGAGGTTCGGATACTCAAAGAGCTTCCTCCCCAACAAAAGCATAAGGTGGAAACAGAGTCCCTCTATTCCCTGCCACCCATTAGTTGGTCTAATATGACATATTACTATGATGCGattcTTCCCCGGATAAAAACATATGGGGTAGTACACTTCTCTAAATCTGATGCAAGACTAGCAAATAATGGGATTCCTGAGGAAGTTCAGAAACTTAGGTGCCGAGTGAACTACCATGCGTTGAGATTTGTTCCTCCAATTGAGCAACTGGCCAAGGAGATTGTTAAGATTCTTAAGGAGAGAGGGCCTTTCTTGTCACTTCATCTTAGATATGAAATGGACATGATAGCTTTCACTGGTTGCAATGAAGGATGCAACAAGGAAGAGATCGATGAGTTAACAAAAATGAGATATGCTTATCCATGgtggaaagagaaagagatagactctgagaagaaaagaaatgatgGTCTTTGCCCTCTGACTCCTGAGGAAACTGCTCTAACACTGCGTGCATTGGACATTGATCGTAATATTCAAGTTTATATTGCTGCTGGGGATATATACAAATCAGAGAAAAGAATGGCAAGTCTCAAAGAAGCCTTCCCAAATCTGGTTAAGAAGGAGACATTATTGGAACCCTCAGAGCTTGATCCTTTCCGGAACCATTCAAACCAAATGGCAGCATTGGATTATTACGTGTCAATAGAAAGTGACATATTTGTTCCCTCATACAAAGGGAACATGGCAAAACTAGTTGAGGGCCACAGAAGGTACTTGGGATTCAAGAAGACAATTCTTTTACACAGAAAATTTCTGGTTAAACTCATTGACCAGTACAAAAATGGGACAATAAGCTGGAACCAGTTCTCCACTTCAGTGAAGGTAGCTCATGCAGACCGTGTAGGGAACCCAACTACAAGATCAGTGGTGCCTGGAAAACCCAAGGAAGAAGACTATTTCTACACAAACCCACAAGAGTGCTTGTCACCAGTTGATGGAATTGAACAAGAGTGGAAGAAAATTCATTAA 1593 0.3923 MLYNKVIFEDSELEKNRKERPYGKIRYVALIKAETLKGLIIGGVQTEKFKGLLNDGIKGDKLRFLMLARKRSSQLKLWTLRVAILMLLWIVVMQFKGLGDMVTPAMFKTRSVFSRPSQRIYENNNGYLMVSSNGGLNQMRAGICDMVTIARYLNVTLIVPELDNTSFWNDRSQFQDIFDADYFISSLRDEVRILKELPPQQKHKVETESLYSLPPISWSNMTYYYDAILPRIKTYGVVHFSKSDARLANNGIPEEVQKLRCRVNYHALRFVPPIEQLAKEIVKILKERGPFLSLHLRYEMDMIAFTGCNEGCNKEEIDELTKMRYAYPWWKEKEIDSEKKRNDGLCPLTPEETALTLRALDIDRNIQVYIAAGDIYKSEKRMASLKEAFPNLVKKETLLEPSELDPFRNHSNQMAALDYYVSIESDIFVPSYKGNMAKLVEGHRRYLGFKKTILLHRKFLVKLIDQYKNGTISWNQFSTSVKVAHADRVGNPTTRSVVPGKPKEEDYFYTNPQECLSPVDGIEQEWKKIH 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1425 530 Gene3D - 264 457 - -
Ssu2g1425 530 CDD O-FucT_plant 127 452 IPR024709 -
Ssu2g1425 530 PANTHER O-FUCOSYLTRANSFERASE FAMILY PROTEIN 33 525 - -
Ssu2g1425 530 PANTHER OS02G0726500 PROTEIN-RELATED 33 525 - -
Ssu2g1425 530 PIRSF UCP009360 99 513 IPR024709 -
Ssu2g1425 530 PIRSF UCP009360 44 111 IPR024709 -
Ssu2g1425 530 Pfam GDP-fucose protein O-fucosyltransferase 127 447 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1425 Ssu-Chr2 58973242 58977614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1425 104 524 Miscellaneous Gene Families AT2G37980 46.009 1.23e-126 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1425 K23280 - gmx:100818153 919.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1425 2 58973242 58977614 Ssu2g1425 2 58973242 58977614 ECH