Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1421 ATGTCTCGGAAACTCGACAGCCCTGTGCAGACTCAGATGGCTGTGGCAGTGATAAGGAGCAGTGCCCTTGGGAGAGAGTACCATGGGAAGCAACCTGCGGGGAGGAGGCGCGTGTTTGTGCAAACAGAGAAAGGTTGTGTGTTGGGTATGGAATTGGATCGTGGGGACAATGCGCACACTGTGAAGAGGAGGTTGCAGCTTGCGCTTAATGTCCCAATTGAAGAGAGTTCACTCACTTTTGGGGATATTGTCTTGAAGAATGACCTTAGTGCTGTTCGGAACGATTCCCCGCTTTTGCTGACCAGGAATCTTATGCACAGGAGCTCGTCCACGCCGTGTCTTTCGCCGACTGGGAGGGACATCCAGCAGAGGGATAAGAGTGGCCCTATTGAGATATTGGGGCAGTCGAATCGGCTTGATAGGATTAAGCATATGATCAGGGACATTATGAAGGCGATTAAGATGGGGATTGATCCGATTCCGGTGCATAGGGGGCTTGGAGGTGCTTACTATTTCAGGAACAGTAAGGGGGATAGTGTTGCCATTGTGAAGCCCACGGATGAGGAGCCTTTTGCCCCGAATAACCCGAAAGGTTTTGTTGGCAAGGCTCTTGGGCAGCCGGGGCTGAAGCTGTCGGTCCGGGTCGGGGAGACTGGGTTTAGAGAGGTGGCAGCGTATCTTCTTGACTATGATCATTTTGCCAATGTCCCGCCGACTGCGTTGGTGAAGATCACACACTCGGTGTTCAATGTCAATGATGGTGTCAATGGGAACAATTTTTGGAGGAAGAGGCTGGTTAGCAAGATTGCCTCTTTCCAGCAGTTCATTCCCCATGATTTTGATGCCAGTGATCATGGGACGTCGAGCTTCCCAGTTGCTTCTGTGCATCGTATAGGGATTTTAGATATTAGGATTCTTAACACGGATAGGCATGCTGGGAACTTGTTGGTAAGGAAACTTGATGGCATTGGGAGTTTTGGCCAGGTGGAGTTGATTCCCATTGATCATGGGCTCTGCCTGCCTGAAACTTTGGAGGATCCATATTTTGAGTGGATTCATTGGCCACAGGCTTCAATTCCGTTTTCGGAGGATGAGCTTGCCTACATTAAAGATCTTGACCCTTCTCTCGATTGTGAGATGCTGAGAAGAGAACTGCCGATGATCCGAGATGCTTGTCTCAGAGTCTTGGAGCTGTGCACCATTTTCCTCCAGAAGGCTGCGGATTTTGGCCTTTGTCTTGCTGAAATCGGTGAGATGATGACTAGGGAGTTCCGCGGTGGGGAGGAGGAACCCAGTGAACTTGAGGTTGTTTGTTTGGAGGCGAGGAAGATGTTGGCGGAGAGGGAAGAGCTGTCTCCTAGGGCTGAGATTCAGATGAGAGATGATGAGTTTCTGTTTGATATAGATTATGATGAAGTTGGATCAGATTTTACGCCAAAGGTGGCAATTGATGACCCTTTAACCAGAGCAACTTTTCAGCCTGCACTTGGGAATGGCCATGCTCGCAGCCCACTTTCCAAATTGGATGAATGCATtgaggaggaagaggaggaagGTGAGGGAGAATCTCCTCAGGGATTTGTTACTTCTGCTGAAGAAAAAATCTCAACTGTTTCAGAACTTTCTGTGTCACTGAAAAATACCATGTTGGATGGGAAAAACCAGAATCAGCAGAAATATTCTGGAGGAAAGGTGGATAATGGTCATTATGCAAATTCATCATCTGGTCATAAGAGTGCCAATGAGCAGCTTCCTGCAAGCATAAGCTTTGTGAAGGTGGCAGATATGACTGAGGATGAATGGGCATTTTTTCTGGACAAGTTTCAAAAGCTGCTGTGTCCGGCATTTGCCAAGAGGAAATCCATAACCTTAGGTCAGGGAGTTCTGAGACAGAGGCTTGGTACTTCGTGCCAGTTTTGA 1920 0.4781 MSRKLDSPVQTQMAVAVIRSSALGREYHGKQPAGRRRVFVQTEKGCVLGMELDRGDNAHTVKRRLQLALNVPIEESSLTFGDIVLKNDLSAVRNDSPLLLTRNLMHRSSSTPCLSPTGRDIQQRDKSGPIEILGQSNRLDRIKHMIRDIMKAIKMGIDPIPVHRGLGGAYYFRNSKGDSVAIVKPTDEEPFAPNNPKGFVGKALGQPGLKLSVRVGETGFREVAAYLLDYDHFANVPPTALVKITHSVFNVNDGVNGNNFWRKRLVSKIASFQQFIPHDFDASDHGTSSFPVASVHRIGILDIRILNTDRHAGNLLVRKLDGIGSFGQVELIPIDHGLCLPETLEDPYFEWIHWPQASIPFSEDELAYIKDLDPSLDCEMLRRELPMIRDACLRVLELCTIFLQKAADFGLCLAEIGEMMTREFRGGEEEPSELEVVCLEARKMLAEREELSPRAEIQMRDDEFLFDIDYDEVGSDFTPKVAIDDPLTRATFQPALGNGHARSPLSKLDECIEEEEEEGEGESPQGFVTSAEEKISTVSELSVSLKNTMLDGKNQNQQKYSGGKVDNGHYANSSSGHKSANEQLPASISFVKVADMTEDEWAFFLDKFQKLLCPAFAKRKSITLGQGVLRQRLGTSCQF 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1421 639 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE 5 639 - -
Ssu2g1421 639 MobiDBLite consensus disorder prediction 552 581 - -
Ssu2g1421 639 Pfam Phosphatidylinositol 3- and 4-kinase 166 416 IPR000403 -
Ssu2g1421 639 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 156 453 IPR000403 -
Ssu2g1421 639 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 5 639 IPR044571 -
Ssu2g1421 639 MobiDBLite consensus disorder prediction 511 533 - -
Ssu2g1421 639 CDD Ubl_ubiquitin_like 38 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1421 Ssu-Chr2 58890898 58892817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1421 1 639 Acyl Lipid Metabolism Gene Families AT1G26270 68.421 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1421 - - gmx:100776828 1103.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1421 2 58890898 58892817 Ssu2g1421 2 58890898 58892817 ECH