Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1409 ATGGCTCCTGTACTGAGCAGAAGCATGGCCGCGGCCTCCCTTGCCTCGCTGcccccttcttcccctctcGCGAGGGCTTCCCCTCTCAGAAGCGCGTTTCTGCCGCCGCAACTCGGTCGCAGGAGGTGCTTCTCCCCCTCCGCGGGGCTGAAGTGGACGCAGCGGCGCGAGGGGAGGGGCGGGCTCGCCGTGCGGTGCGAGGCCGCCGTGGCGGAGAAGGACGAGGCCACCGGGGAGAAGTTTGAGTACCAGGCCGAGGTGAGTCGATTGTTGGATTTGATTGTTCACAGTCTATATAGCCACAAGGAAGTTTTCCTTCGAGAACTTGTCAGTAATGCTAGTGATGCTTTGGACAAGTTGAGGTTCTTAAGTGTAACTGAGCCTTCTTTGCTTGGAGATGCTGGAGATCTAGAGATACGTATCAAATCTGATCCAGACAATGGCACTATTACTATAACAGATACTGGTATTGGAATGACTAAAGAAGAGCTCATTGATTGTCTTGGAACCATTGCTCAGAGTGGtacttcaaaatttttgaaggCTCTTAAGGAAAACAAGGATCTAGGAGCAGATAATGGTTTGATTGGTCAATTTGGTGTTGGATTCTACTCTGCTTTTCTTGTTGCTGAGAGGGTTGTTGTTTCTACAAAGAGCCCAAGATCAGATACGCAGTATGTATGGGAAGCAGTAGCTGACAGTAGCTCTTATGTGATAAGAGAAGAAACTGATCCTGAAAAGCTTTTGCGTCGTGGTACACAGATTACACTCTATTTAAGAGATGACGACAAGTATGAATTCTCAGAGCCAAGCAGGATTCAGGGTTTGGTGAAGAATTACTCACAGTTTGTTTCCTTCCCCATATACACATGGCAAGAAAAATCAAGAACTGTGGAGGTGGAAGAGGAGGAAGAACCCAAAGAAGGGGAAGAACCAAAAGCAGAGGGTGAgaaaaagaagttgaaaaagACTAAAACTGAGAAGTATTGGGACTGGGAATTAACCAATGAAACAAAGCCAATATGGTTGCGGAACCCAAAGGAAGTTCAAAAGGACGAGTACAATGAATTTTACAAGAAGACTTTTAGTGAATTCTTAGAACCACTTGCTTATACTCACTTCACTACTGAGGGTGAGGTTGAGTTCAGAAGTATTCTATATGTTCCAGGAATGGGGCCTCTTAACAATGAAGAAGTAGTGAACCCTAAAACAAAGAACATACGCTTGTATGTTAAGCGTGTATTCATTTCGGATGATTTTGATGGAGAGCTGtTTCCACGTTACCTGAGCTTTGTGAAGGGTGTGGTCGATTCAGATGACCTTCCTCTCAATGTTTCTCGGGAGATCCTTCAAGAAAGCAGAATTGTAAGAATAATGAGAAAGAGACTTGTCAGGAAGGCATTTGATATGATTCAAGACATTGctgaaagtgaaaataaagagGACTACAAGAAATTCTGGGAGAACTTTGGCAGGTTCATAAAATTAGGATGCATTGAAGACACTGGAAATCATAAGCGCATAACACCACTATTGAGGTTTTACACTTCCAAAAGTGAGGAGGAACTTAAAAGCCTAGATGATTATGTTGAAAACATGGGTGAAAACCAGAAGGCTATCTTTTACCTAGCAACTGACAGCTTGAAAAGTGCAAAGACTGCTCCATTTTTGGAGAAATTGGTTCAAAAAGATATTGAGGTTCTTTATTTGGTTGAACCTATTGATGAGGTTGCCATTCAGAACCTACAGacatacaaagaaaagaaatttgttGATATCAGCAAGGAGGATTTGGAATTAGGTGATGAGGACGAGGTCAAAGAGAGGGAAAACAAACAAGAATACAACCTACTTTGTGATTGGATAAAACAACAGCTTGGTGATAAGGTGGCAAAAGTTCAAATCTCAAAGCGGTTGAGTTCATCTCCCTGTGTGCTTGTCTCAGGGAAGTTTGGTTGGTCTGCAAACATGGAGAGACTAATGAAGGCACAAGCTCTTGGAGACACTTCAAGTTTGGAGTTTATGAGGGGAAGAAGAATATTGGAGATTAATACAGATCACCCCATTATTAAAGACTTGAGTGCTGCCTGCAAGAATGCACCTGACAGCAGCGAAGCTAAGAGAGCTGTTGACCTCTTATATGACACGGCACTAATTTCTAGTGGATTTTCTCCTGACAGCCCTGCTGAGTTGGGAAGTAAAATTTACGAAATGATGGCCATGGCCTTGGGAGGAAGATGGGGTAGATCAGAAGAGGAGGGAGATGCATCTGTTGAAGCTGATTCAAGATCAGGTGAAGAAGCTTCAGAGCCAGAAGTTTATGAAGCTTCTGAAGTCATTGCAGAGAGTGATCCTTGGACAACTGATTAG 2370 0.4228 MAPVLSRSMAAASLASLPPSSPLARASPLRSAFLPPQLGRRRCFSPSAGLKWTQRREGRGGLAVRCEAAVAEKDEATGEKFEYQAEVSRLLDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKSDPDNGTITITDTGIGMTKEELIDCLGTIAQSGTSKFLKALKENKDLGADNGLIGQFGVGFYSAFLVAERVVVSTKSPRSDTQYVWEAVADSSSYVIREETDPEKLLRRGTQITLYLRDDDKYEFSEPSRIQGLVKNYSQFVSFPIYTWQEKSRTVEVEEEEEPKEGEEPKAEGEKKKLKKTKTEKYWDWELTNETKPIWLRNPKEVQKDEYNEFYKKTFSEFLEPLAYTHFTTEGEVEFRSILYVPGMGPLNNEEVVNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKAFDMIQDIAESENKEDYKKFWENFGRFIKLGCIEDTGNHKRITPLLRFYTSKSEEELKSLDDYVENMGENQKAIFYLATDSLKSAKTAPFLEKLVQKDIEVLYLVEPIDEVAIQNLQTYKEKKFVDISKEDLELGDEDEVKERENKQEYNLLCDWIKQQLGDKVAKVQISKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINTDHPIIKDLSAACKNAPDSSEAKRAVDLLYDTALISSGFSPDSPAELGSKIYEMMAMALGGRWGRSEEEGDASVEADSRSGEEASEPEVYEASEVIAESDPWTTD 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1409 789 CDD HATPase_Hsp90-like 88 284 - -
Ssu2g1409 789 Gene3D - 336 508 - -
Ssu2g1409 789 PRINTS 90kDa heat shock protein signature 251 268 IPR020575 -
Ssu2g1409 789 PRINTS 90kDa heat shock protein signature 149 166 IPR020575 -
Ssu2g1409 789 PRINTS 90kDa heat shock protein signature 270 288 IPR020575 -
Ssu2g1409 789 PRINTS 90kDa heat shock protein signature 167 184 IPR020575 -
Ssu2g1409 789 PRINTS 90kDa heat shock protein signature 79 99 IPR020575 -
Ssu2g1409 789 PRINTS 90kDa heat shock protein signature 100 122 IPR020575 -
Ssu2g1409 789 PRINTS 90kDa heat shock protein signature 196 218 IPR020575 -
Ssu2g1409 789 Pfam Hsp90 protein 266 767 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Ssu2g1409 789 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 25 778 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Ssu2g1409 789 Hamap Chaperone protein HtpG [htpG]. 71 740 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Ssu2g1409 789 SUPERFAMILY Ribosomal protein S5 domain 2-like 338 596 IPR020568 -
Ssu2g1409 789 PIRSF HSP90_HTPG 54 780 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Ssu2g1409 789 Gene3D - 596 743 IPR037196 -
Ssu2g1409 789 SMART HKATPase_4 101 263 IPR003594 -
Ssu2g1409 789 Gene3D - 67 309 IPR036890 -
Ssu2g1409 789 Gene3D - 509 595 - -
Ssu2g1409 789 MobiDBLite consensus disorder prediction 748 770 - -
Ssu2g1409 789 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 102 261 IPR003594 -
Ssu2g1409 789 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 79 294 IPR036890 -
Ssu2g1409 789 MobiDBLite consensus disorder prediction 298 320 - -
Ssu2g1409 789 MobiDBLite consensus disorder prediction 747 789 - -
Ssu2g1409 789 PANTHER HEAT SHOCK PROTEIN 90-5, CHLOROPLASTIC 25 778 - -
Ssu2g1409 789 ProSitePatterns Heat shock hsp90 proteins family signature. 99 108 IPR019805 GO:0005524|GO:0006457|GO:0051082
Ssu2g1409 789 SUPERFAMILY HSP90 C-terminal domain 618 739 IPR037196 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1409 Ssu-Chr2 58682933 58690355 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1409 K09487 - gmx:100819778 1390.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1409 2 58682933 58690355 Ssu2g1409 2 58682933 58690355 ECH