Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1312 ATGGCTTCCATGAgctctctgaaaatgatttcgtctctcaaactctctcattcaaGTTCTATCTCTCCTCTTCAAACCCAAAAGCAAGTAGGTTCTAGTCTCTTTCAATCCTTCCCAACTAAAACCTTAAAATTCTCTGCTTCCCCGCAAGTACCTACAACCAGAAGAAGTACCAACAACACCACAACCACTGCATTCTTCTTCAATAACCCAAAGCAGCATCAAGATTCTTCAAAGCCAGAGAGCAAGCATTCCTCATTCATGAATTTGTTCATTTCTATAGCCAAAGTTCAAGAACTCTTTGTCTATGAGATCAATGAACGTGACAGAGGCAGTCCTGCATACCTTAGGCTAAGCCAGAAGCCTGTTAACTCTCTAGGAGATTTAGTGCCATTCAGCAACAAGATATACTCTGGAAACTTGGAAAAGAGATTAGGGATAACTGCAGGCTTATGTGTGCTCATACAACATGTACCTGAGAAAAAGGGTGACAGATATGAGGCCATTTACAGCTTCTACTTTGGAGACTATGGCCACATATCAGTGCAAGGAGCTTATCTGACATACCAAGACACATATCTAGCTGTTACAGGAGGCTCTGGAATCTTTGAAGGTGTGTCTGGACAGGTGAAACTTCAGCAACTTGTGTTCCCATTCAAGCTGTTCTACACCTTCTACTTGAAGGGCATTCCTGATTTGCCAGCTGAGCTACTTGGGAAGCCTGTTGAACCGTCGCCAAACGTTGAGCCATCTCCAGCCGCTAAGGCTGCTGAGCCAGATGCCTCTATACCAAACTTCACCAATTGA 807 0.4164 MASMSSLKMISSLKLSHSSSISPLQTQKQVGSSLFQSFPTKTLKFSASPQVPTTRRSTNNTTTTAFFFNNPKQHQDSSKPESKHSSFMNLFISIAKVQELFVYEINERDRGSPAYLRLSQKPVNSLGDLVPFSNKIYSGNLEKRLGITAGLCVLIQHVPEKKGDRYEAIYSFYFGDYGHISVQGAYLTYQDTYLAVTGGSGIFEGVSGQVKLQQLVFPFKLFYTFYLKGIPDLPAELLGKPVEPSPNVEPSPAAKAAEPDASIPNFTN 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1312 268 Gene3D - 84 268 IPR044859 -
Ssu2g1312 268 MobiDBLite consensus disorder prediction 241 268 - -
Ssu2g1312 268 MobiDBLite consensus disorder prediction 46 75 - -
Ssu2g1312 268 Pfam Allene oxide cyclase 95 266 IPR009410 GO:0016853
Ssu2g1312 268 PANTHER ALLENE OXIDE CYCLASE 4, CHLOROPLASTIC 3 268 - -
Ssu2g1312 268 SUPERFAMILY Allene oxide cyclase-like 96 268 IPR034871 GO:0009695|GO:0046423
Ssu2g1312 268 MobiDBLite consensus disorder prediction 46 82 - -
Ssu2g1312 268 PANTHER ALLENE OXIDE CYCLASE 4, CHLOROPLASTIC 3 268 IPR009410 GO:0016853
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1312 Ssu-Chr2 56023705 56024643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1312 59 268 Acyl Lipid Metabolism Gene Families AT3G25780 63.679 2.92e-91 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1312 K10525 - gmx:100775373 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1312 2 56023705 56024643 Ssu2g1312 2 56023705 56024643 ECH