Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1299 ATGGCTTCGAACCCAGAAACATACAAGCCATATGGGAAGCCACCCACAAAGGGACAATGGACCACTGGCCTCTATGATTGCTGGGATGACCCCTCTCATTGTTGCTTCACATGCTGTTGTCCTTGCATCACCTTTGGGCAGATTGCGGAGATAGTTGATGGAGGGACGATATCCAAAAATGCAGCGTGCTGCATTTATATTTACACGCATTGGATGAGATGGCTATATGGTGCCACTTACAGATCCAAATTGCGAAGACTGTTCTCACTGCCAGAGGAACCGTACTCTGATTCATTTGTTCATTGTTGTTGCTGTGTTTGTTCCCTCACCCAAGAATACAAAGAACTCAAAAACCGTAGAATTGATCCTTCCATTGgttGGGAAGGTAACGTTGAGAAGTGGAAGAGGGAAGGCGTAGAGCCTCCAATTGTTCCCCCCATGTCTCGTTGA 450 0.4644 MASNPETYKPYGKPPTKGQWTTGLYDCWDDPSHCCFTCCCPCITFGQIAEIVDGGTISKNAACCIYIYTHWMRWLYGATYRSKLRRLFSLPEEPYSDSFVHCCCCVCSLTQEYKELKNRRIDPSIGWEGNVEKWKREGVEPPIVPPMSR 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1299 149 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 19 118 IPR006461 -
Ssu2g1299 149 PANTHER PROTEIN PLANT CADMIUM RESISTANCE 9-LIKE 15 148 - -
Ssu2g1299 149 Pfam PLAC8 family 20 115 IPR006461 -
Ssu2g1299 149 PANTHER DUF614 FAMILY PROTEIN-RELATED 15 148 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1299 Ssu-Chr2 55662393 55665581 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1299 - - ccaj:109793155 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1299 2 55662393 55665581 Ssu2g1299 2 55662393 55665581 ECH