Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1288 ATGGATTTGGATGATGGAGCTAAAAAGGAGCTTCAGGAAGTtggtataaaaaaatcaaagggTTTTCCTCTTGTTGGGACTAGTCTTGCCTCTATGGAGTCCTTGTCCATGCCACAGGTTCAGGAGGTTGTTCTTTCTGCAGACATGCAATGTGAGAAGTGCCAGAAGAGGGTTACTGACATTATTGCAAAAATGAATGTAGAGACAGAGTCCGTGGTGATTAATGTTTTGGAAAAGAAAGTGACACTTACTTTCAGATTACCATCTATTGGGAAAGTTTCCACACGGCAAATTACTCCCATCAACAGGAATTCTCTCCCCAAAATTGCCATCATCAGACGGATATTTCGTTCATCCCGGGTTGACCAGTGA 372 0.4059 MDLDDGAKKELQEVGIKKSKGFPLVGTSLASMESLSMPQVQEVVLSADMQCEKCQKRVTDIIAKMNVETESVVINVLEKKVTLTFRLPSIGKVSTRQITPINRNSLPKIAIIRRIFRSSRVDQ 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1288 123 Gene3D - 37 101 - -
Ssu2g1288 123 PANTHER OS08G0431150 PROTEIN 5 82 - -
Ssu2g1288 123 SUPERFAMILY HMA, heavy metal-associated domain 43 88 IPR036163 GO:0046872
Ssu2g1288 123 PANTHER PROTEIN, PUTATIVE-RELATED 5 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1288 Ssu-Chr2 55495629 55497281 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1288 - - gmx:100811739 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1288 2 55495629 55497281 Ssu2g1288 2 55495629 55497281 ECH