Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1169 ATGGCTTCCTCTCCCACCTCAGAAAGCACAAAACTAGAGGGAGTAGCTGGTGCTACCGGGGAGAAACCCATTCCACTTCATGGAAACGTTCTGCAGAAGCATGCTGCATTCTTCGACAAGAATCAAGATGGTGTTATTTACCCATGGGAAACTTTTCAAGGCTTACGTGAAATTGGGAATGGGATCTTGGCGTCCGTTGGACTTTCTCTTTTCATCAATTTGGCTCTTAGTCAAGCCACTCGTCCAGGGAAGTTTCCATCTTTACTTTTCccaattgaaattaagaatatCCAACTCGGCAAACATGGCAGTGACACTGGAGTCTATGATACTGAAGGAAGGTTTGttccttcaaaatttgaagaaattttcacaaaacatgcACATACTCATCCAAATGCTTTAACATATGATGAGCTAAAGGAGATGTTAAAGGCAAATAGAGAGCCCAAAGATTTCAAAGGAAGAATTGGTGGCAAGGTTGAATGGAAAGCCCTTTACAAACTTGCCAAAGACAAGAATGGCTTACTACAGAAGGAAACAATTAGAGGTGTTTATGATGGAAGCGTGTTTGAACTATTGAAAAAGGAACATTCTGcacaaaaaaagaagtaa 615 0.3756 MASSPTSESTKLEGVAGATGEKPIPLHGNVLQKHAAFFDKNQDGVIYPWETFQGLREIGNGILASVGLSLFINLALSQATRPGKFPSLLFPIEIKNIQLGKHGSDTGVYDTEGRFVPSKFEEIFTKHAHTHPNALTYDELKEMLKANREPKDFKGRIGGKVEWKALYKLAKDKNGLLQKETIRGVYDGSVFELLKKEHSAQKKK 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1169 204 SUPERFAMILY EF-hand 36 186 IPR011992 -
Ssu2g1169 204 Pfam Caleosin related protein 29 193 IPR007736 -
Ssu2g1169 204 MobiDBLite consensus disorder prediction 1 20 - -
Ssu2g1169 204 PANTHER CALEOSIN 3 204 - -
Ssu2g1169 204 PANTHER PEROXYGENASE 3-RELATED 3 204 IPR007736 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1169 Ssu-Chr2 52331365 52334831 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1169 18 204 Acyl Lipid Metabolism Gene Families AT1G70670 62.032 7.21e-84 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1169 K17991 - gmx:100800378 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1169 2 52331365 52334831 Ssu2g1169 2 52331365 52334831 ECH