Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1027 AtggattcttcttcttcttcttcttcggcCAAGGAGCAATATGTAACTGAGGTTACCGAGAATTATGAGACAACATGCTGGGGTTGTGGACTGCATGTTTTGCTTCCATCATGTGCATCTGCTTTCAAATGTGGCTGGTGTGGGGCCATTACAGATGAGAACAAACAGAAACATGACCGGAAGTGCATCAGGTGGAGAGTAGTGCGTGATCGATGCTTTGTTTCTGTTGTCCTcgtatttatgttttttgtaatATTTGGTGGGGTGTGGGCAGTTTATCCTGTTGTCTTTTCTGTCAGTATTCTTTGTGGAGTTTTTCACTCAATCATTACAGCAATCTTGTCCATAGCCACCGTTTCCTTTTTCAGCTTTGCAGCATTTAGGTGTGCTGGCACACCACCAAACATATTATGGGGAAGCTACCCCACTGTAGGGAAAGGTGACCTTGAAAATTATACTTTCTGTCACTACTGCTCAAAGCCAAAGTCACCTAGAGCTCATCATTGTCTTTCTTGTAGAAAATGTATACTGGACATGGATCATCACTGCCCATTTATTGGGAACTGTGTTGGTGCAGTTAATCACCGCAGCTTCATTGCCTTCCTCATTTCTGCAGTGTTGAGCACAATCTATGTCTCTATCGTGTCTGCATATGCAGGCTTGTGTACATGGCCACCATTGAAATTCTCCCTTGGACAACTAAATGGGGTTAGTAGCAGCGATCTGGGATGGAGAACTATGAATGAAATTGTTGTTGCATTCCTGAGATCTGCCCTGCTTCTTTCCTCTAGGGGACTCATTCTTGCTTATCTGTTCATTGCAAGTGTTTCGTTGCAGATAGGATTGAGCGTTCTTTTATGGCAGCAGCTCTCCTATATATACCAGGGCAAAACTTATTTGAGTCACTTGAGCTCACAAGCAGATAAtgcagaagaaaagaaagattgcCAAAATCTTGTTAGATTTTTTGATCTTCAATATTCTGTAACGAGATTTTTCCCAAACTTTCGTGTTACTCGAAAGAGACACATCAAATGA 1038 0.3969 MDSSSSSSSAKEQYVTEVTENYETTCWGCGLHVLLPSCASAFKCGWCGAITDENKQKHDRKCIRWRVVRDRCFVSVVLVFMFFVIFGGVWAVYPVVFSVSILCGVFHSIITAILSIATVSFFSFAAFRCAGTPPNILWGSYPTVGKGDLENYTFCHYCSKPKSPRAHHCLSCRKCILDMDHHCPFIGNCVGAVNHRSFIAFLISAVLSTIYVSIVSAYAGLCTWPPLKFSLGQLNGVSSSDLGWRTMNEIVVAFLRSALLLSSRGLILAYLFIASVSLQIGLSVLLWQQLSYIYQGKTYLSHLSSQADNAEEKKDCQNLVRFFDLQYSVTRFFPNFRVTRKRHIK 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1027 345 ProSiteProfiles DHHC domain profile. 153 203 - -
Ssu2g1027 345 PANTHER S-ACYLTRANSFERASE 28 345 - -
Ssu2g1027 345 Pfam DHHC palmitoyltransferase 152 302 IPR001594 GO:0016409
Ssu2g1027 345 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 28 345 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1027 90 214 Lipid Metabolism Gene Families AT4G22750 31.169 1.62e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1027 - - gmx:100792359 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1027 2 48358912 48367892 Ssu2g1027 2 48358912 48367892 ECH