Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0936 ATGAAGGTAGGATCTGGTAAAGGGAGAAAAGTGTGCCTGACGGTGACAGGTGTTGTGATTGCAATTGTATTGCTAATTGTGATACTAGCGTTGACAGTGTTCAAAGCCAAGCATCCTGTTACCACAGTGGAGTCAGTGAAGCTAGAGGACTTTCACGTGGGCTTGGATATAGCAAAACTGAAGGTAGATTTGAATGTGACCCTGGACGTGGATGTCTCGGTGAAGAACCCGAATAAGGTGGGGTTCAAGTACTCGGACAGCACCGCCCACCTCAATTACAGAGGGCAGCTGATAGGTGAAGTCCCTGTCCCTGCTGGAGAGATTTCGTCCGGTGAGACCAAAGGATTCAACCTCACTGTCACCATTATGGCTGACCGTTTGCTCTCCGATTCCCAGCTTTACTCTGATGTCACATCTGGTACATTGCCCCTAAACACTTTCGTGAAGATTTCAGGCAAAGTCAGCATCTTAGGCTCTATCAAAGTCCATGTGGTGTCCTCCACATCTTGTGATTttgcaattaatatttctactagAGCAGTTGGGAACCAAGAGTGCCAATACAAGACAAAACTTTGA 579 0.456 MKVGSGKGRKVCLTVTGVVIAIVLLIVILALTVFKAKHPVTTVESVKLEDFHVGLDIAKLKVDLNVTLDVDVSVKNPNKVGFKYSDSTAHLNYRGQLIGEVPVPAGEISSGETKGFNLTVTIMADRLLSDSQLYSDVTSGTLPLNTFVKISGKVSILGSIKVHVVSSTSCDFAINISTRAVGNQECQYKTKL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0936 192 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 7 191 - -
Ssu2g0936 192 SUPERFAMILY LEA14-like 29 165 - -
Ssu2g0936 192 Gene3D - 27 173 - -
Ssu2g0936 192 Pfam Late embryogenesis abundant protein 72 164 IPR004864 -
Ssu2g0936 192 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 7 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0936 Ssu-Chr2 46443319 46443897 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0936 - - gmx:100811806 313.538