Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0926 ATGATGTTAAAAATGAAGATTGTGCAACGAGTAGTGGCGGGACTGGCGTATTTGCTAGCCTTATTAACCAAAGTATTGTTGAGCCAGAAGGGTCAGCCTCAGCACCCCAAGCAGAGCGGTGAGAGACCCGATGAGGCTAATGAGAGGTATGGTCTGAGTTGGAGGCTAGCGGTTGAAGCAAACAATGTGCGTCCGTGGCGAACGGTCCCACCTCAGTGCTACAACCACGTCCAGAACTACATGTCTGGTGGCCAATACGAGCGGGACCTTAAACTCGTCGTCGAACATATCTTGTTGTATGCCTCCGAGATTCCCCTTGCCGGTGATGGCATGGATGCCTGGATTTTGGATGTTGACGACACTTGCATCTCCAACATTTCTTATTACAAAGCTAAGCGATTTGGGTGCGACCCATTTGACTCGGCGATATTCAAGGCATGGATTAAGAAGGGAATGTGTCCCGCAAATCCTGCGGTGCGACATTTGTTTAACGCGTTGATAGAGAGAGGATTTAAGGTGTTCTTGCTAACAGGTAGAGACGAAGCAACTCTCGGTAAAATCACCACTGACAACTTGCGTAACCAAGGATTCGTTGGCTATGAACGTCTTATTCTGAGGACCGCTCAATACAAAGGGCAAAGTGCGGTGAGATACAAGTCAGCGATTCGGAAAGAGATAGAAGGACAAGGGCACAGGATATGGGGAAATGTGGGAGACCAGTGGAGTGATCTTCAAGGAGAGTGTTTGGGCAATCGTACTTTCAAGATCCCCAATCCCATGTATTTCATTTCTTGA 795 0.4805 MMLKMKIVQRVVAGLAYLLALLTKVLLSQKGQPQHPKQSGERPDEANERYGLSWRLAVEANNVRPWRTVPPQCYNHVQNYMSGGQYERDLKLVVEHILLYASEIPLAGDGMDAWILDVDDTCISNISYYKAKRFGCDPFDSAIFKAWIKKGMCPANPAVRHLFNALIERGFKVFLLTGRDEATLGKITTDNLRNQGFVGYERLILRTAQYKGQSAVRYKSAIRKEIEGQGHRIWGNVGDQWSDLQGECLGNRTFKIPNPMYFIS 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0926 264 PANTHER PLANT ACID PHOSPHATASE 6 264 - -
Ssu2g0926 264 PIRSF VSP 3 264 IPR014403 -
Ssu2g0926 264 Gene3D - 46 264 IPR023214 -
Ssu2g0926 264 CDD HAD_VSP 77 263 - -
Ssu2g0926 264 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 46 262 IPR005519 -
Ssu2g0926 264 SUPERFAMILY HAD-like 99 261 IPR036412 -
Ssu2g0926 264 TIGRFAM plant-AP: plant acid phosphatase 45 263 IPR010028 GO:0003993
Ssu2g0926 264 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 6 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0926 Ssu-Chr2 46255004 46260563 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0926 - - gmx:102661443 425.631