Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0924 ATGGCGCAAAGAGTAGGAGAGTTGTTGGTGCTGGTGTTGGTGTTATTATTGTTGGCATCGGGATTAATGTTTCCAAAGACAAAGGCAATGAGCACGAGACCTCACAAAAGGGGCAAAGAGTCCTCAGGTTCTGGGTCCTCCAGTAGTGATGGGGATGCAAGCTTTTGCTTGAGTTGGAGATTGGCAGTGGAGGCAAACAATGTGGTTGCATGGCCAACAGTCCCACCTCAGTGTTCCCGATATGTCGAGACTTACATGATCGATGGTCAGTACGACCGGGACTTGGACTTGATATTGGAAGAAATCTTGGGTTATGTCAACCAAACATTTCTTGTTGGAGATGCCATGGATGCTTGGGTTTTGGATGTTGATGACACTTGCATCTCTAACATCTATTATTACAAAGGCAAGAAATATggGTGTGATCCGTATGACCCATCTGCCTTTAGGACGTGGGCCACGAAAGGAGGGTGCCCTGCAATTCCTTCCGTACTAAGGTTGTTTAACATATTAGTAGGTAAAggatttaaagtatttttactcACCGGAAGAGATGAAGAGACCCTTGGTCAAGTTACCCAGAACAACTTGCACAATCAAGGATTTATTGGCTATGAACGACTTATTTTGAGGAGTGCAGCATATAAAGGAAAAAGTGCTGTGAAATACAAATCTGATGTACGAAAGCAGTTACAAGACCAAGGTTACAGGATATGGGGGAATGTGGGCGACCAGTGGAGTGATCTTCAGGGAAACTATTTGGGAAACCGTACTTTCAAGCTACCTAATCCCATGTACTTTGTTCCCTAA 810 0.4333 MAQRVGELLVLVLVLLLLASGLMFPKTKAMSTRPHKRGKESSGSGSSSSDGDASFCLSWRLAVEANNVVAWPTVPPQCSRYVETYMIDGQYDRDLDLILEEILGYVNQTFLVGDAMDAWVLDVDDTCISNIYYYKGKKYGCDPYDPSAFRTWATKGGCPAIPSVLRLFNILVGKGFKVFLLTGRDEETLGQVTQNNLHNQGFIGYERLILRSAAYKGKSAVKYKSDVRKQLQDQGYRIWGNVGDQWSDLQGNYLGNRTFKLPNPMYFVP 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0924 269 PANTHER HAD SUPERFAMILY, SUBFAMILY IIIB ACID PHOSPHATASE 6 269 - -
Ssu2g0924 269 CDD HAD_VSP 82 268 - -
Ssu2g0924 269 MobiDBLite consensus disorder prediction 30 51 - -
Ssu2g0924 269 PIRSF VSP 4 269 IPR014403 -
Ssu2g0924 269 SUPERFAMILY HAD-like 98 266 IPR036412 -
Ssu2g0924 269 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 6 269 - -
Ssu2g0924 269 TIGRFAM plant-AP: plant acid phosphatase 50 269 IPR010028 GO:0003993
Ssu2g0924 269 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 52 268 IPR005519 -
Ssu2g0924 269 Gene3D - 51 269 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0924 Ssu-Chr2 46142344 46144819 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0924 - - gmx:100777758 443.351