Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0910 ATGGAGCCTTTACTCCTACTTTCTTCACCTTCATCATCCACCCCATTACCGTTCTTCATCTCAAACACCCTTCCTTTCCATCCAAAACCCAATCTTTCCATCAAACTCCATTGCTCCCTCAAAAACTCCCAATTCTGGGGGAGAAACTTGACTTGGGTCCCATCACAATCAGCTGAAAGAACAAAATTGGATGCAGCGAGGCCCGTAATAACGGCAGCGGTGAAGAGAAGGAAAGAGCTTCCCTTCGACAACGTCATCCAGAGGGACAAGAAGCTCAAATTCGTGCTCAAGGTAAGGAAGATTCTAGTGACTCAACCAGATAGGGTTATGTCGCTTAAGCAACTTGGTAAGTTCAAAAGAGACTTGGGGCTTGATAAAAGGAGGAGACTTATTGCCATATTGAAGAAATTCCCGGCAGTGTTTCAGATTTTGGAAGAAGGGGTTTACTCCCTCAAGTTCAAAATGACCCCCGAAGCCGAGAGGCTCTATTTTGAGGAATTGAGGGTTAGGAATGAGATGGAAGAGTTGGTGGTTGTCAAGCTTAGGAAGTTGTTGATGATGTCGCTCGAAAAAAGGATTTTGTTAGAGAAAATCGCACATCTCAAGACCGATTTGGGTCTCCCGCAGGAGTTTCGGGACACCATTTGTCATAGGTACCCTCAGTACTTCAAAGTGGTTGCAACTCAGCGTGGCCCTGCTTTGGAATTGACTCATTGGGACCCCTGA 726 0.4587 MEPLLLLSSPSSSTPLPFFISNTLPFHPKPNLSIKLHCSLKNSQFWGRNLTWVPSQSAERTKLDAARPVITAAVKRRKELPFDNVIQRDKKLKFVLKVRKILVTQPDRVMSLKQLGKFKRDLGLDKRRRLIAILKKFPAVFQILEEGVYSLKFKMTPEAERLYFEELRVRNEMEELVVVKLRKLLMMSLEKRILLEKIAHLKTDLGLPQEFRDTICHRYPQYFKVVATQRGPALELTHWDP 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0910 241 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 12 241 IPR040293 GO:0000373|GO:0003723
Ssu2g0910 241 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 12 241 IPR045040 GO:0003723
Ssu2g0910 241 Pfam Plant organelle RNA recognition domain 78 241 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0910 Ssu-Chr2 45970821 45971546 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0910 - - gmx:100810556 395.201