Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0903 ATGCTAATGGCTTCTTCAACATTCTTTCTAGCTCTTCTCCTTTTGCTAATTCTCCATGATTTTCAACACTCATCTTCGTTCTCCCTCTCCGTGGAGAAACTCAAAGAAGACGTAATAGTGTCATCCCCAAAGGGCACTTTCACCTCTGGGTTTTATCTCGTAGGGCAAAACGCTTACTGCTTCGCCATATGGTACTCCCAACCACCTCACACCGTTGTTTGGATGGCCAATCGGGACCAGCCGGTGAACGGAAAACGCTCCACACTTTCCCTTCTCAAAACTGGTGAACTCGTCTTAACCGACGCAAGCCAGTTTAAAGTGTGGTCCACAAACACCCTCACCTCATCAAAACAAGTCGAGTTACAATTGTACGACACCGGCAACCTCGTTCTCCTCAACAACCAAACCCATTCCTCCATCGTTCTCTGGCAAAGCTTCGATTTCCCAACGGACACGCTCCTTCCTAATCAACCTCTTAGCAAAAGCACCAACCTCGTTTCGTCGAGAAGCGAGACCAACTTTTCCTCTGGTTTCTACAAGCTCTTCTTTGACTTCGAGAATGTTCTCCACCTCATGTACCAAGGCCCTCGAGTTTCGAGCCTTTACTGGCCTGATCCTTGGCTTCAGAATAACAATTTCGGTAGCGGTAATGGTAGATCCACTTACAACGATAGCAGGGTTGTTGTACTCGATCATTTCGGCAACTTAGTTTCTTCTGATAACTTCACTTTCAGTACATGTGACTCCGGGACGGTGCTCCAACGAAGATTGACCCTTGATCACGACGGTAATGTTCGTGTGTATAGCAAGAAAGATGGAGAAGAGAAGTGGTCAATCTCAGGGCAATTCAAGTCACAACCCTGTTTTATTCATGGGATTTGTGGACCCAATAGTATCTGCAGTTATGAACCAAAAACTGGTAGAAAGTGTTCGTGCGTTCCAGGGTATAGCTGGGTTGACAGTGAAGATTGGTCTCAAGGTTGTGCACCGAATTTCCAGCTTAggtgcaacaacaacaacactgaGCAAGAGTCTCGCTTCATGCGGTTACCCGAGGTTGATTTTTATGGATACGACTATGGCTTCTTTAGGAATCACACGTATGAAGAGTGTGAGAAACTGTGCTTGCAGTTGTGCGAATGCAAAGGGTTTCAACACAGCTTTTCGGAGCAAAACGATGTGTTTCAGTGCTACCCCAAGACGCAGTTGCTAAATGGGCATCATGCTGTCGGTTTCACCGGATCAATCTTCTTGCGACTTCCCAGGAGTAGTCCTTTGTCCCTCCATGACTATGATAATAATGGCCTGGTTTGTGGGGGAAATAGTGGAGGAGCGAAAGTACTAGAGAGACCGTAtgtggaagaaaaagaaaatgggtcGGTGAAGTTCATGCTGTGGTTTGCGAGTGCCTTGGGAGGAATTGAGGTTGTGTGCTTCTTTTTGGTGTGGTGTTTTTGTTTAGGAACAAAGAGACATTACATAAACAAGGGTATGTTGTTGCGGCTGCAACGGGGTTTAGGAAATTTTGTTACTCTGAACTGA 1542 0.4475 MLMASSTFFLALLLLLILHDFQHSSSFSLSVEKLKEDVIVSSPKGTFTSGFYLVGQNAYCFAIWYSQPPHTVVWMANRDQPVNGKRSTLSLLKTGELVLTDASQFKVWSTNTLTSSKQVELQLYDTGNLVLLNNQTHSSIVLWQSFDFPTDTLLPNQPLSKSTNLVSSRSETNFSSGFYKLFFDFENVLHLMYQGPRVSSLYWPDPWLQNNNFGSGNGRSTYNDSRVVVLDHFGNLVSSDNFTFSTCDSGTVLQRRLTLDHDGNVRVYSKKDGEEKWSISGQFKSQPCFIHGICGPNSICSYEPKTGRKCSCVPGYSWVDSEDWSQGCAPNFQLRCNNNNTEQESRFMRLPEVDFYGYDYGFFRNHTYEECEKLCLQLCECKGFQHSFSEQNDVFQCYPKTQLLNGHHAVGFTGSIFLRLPRSSPLSLHDYDNNGLVCGGNSGGAKVLERPYVEEKENGSVKFMLWFASALGGIEVVCFFLVWCFCLGTKRHYINKGMLLRLQRGLGNFVTLN 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0903 513 Pfam D-mannose binding lectin 71 163 IPR001480 -
Ssu2g0903 513 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 10 493 - -
Ssu2g0903 513 Pfam S-locus glycoprotein domain 238 317 IPR000858 GO:0048544
Ssu2g0903 513 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 204 IPR036426 -
Ssu2g0903 513 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 10 493 - -
Ssu2g0903 513 ProSiteProfiles Bulb-type lectin domain profile. 25 144 IPR001480 -
Ssu2g0903 513 CDD B_lectin 41 149 IPR001480 -
Ssu2g0903 513 Gene3D - 29 147 IPR036426 -
Ssu2g0903 513 SMART blect_4 31 149 IPR001480 -
Ssu2g0903 513 ProSiteProfiles PAN/Apple domain profile. 336 424 IPR003609 -
Ssu2g0903 513 CDD PAN_AP_plant 332 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0903 Ssu-Chr2 45840283 45841824 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0903 - - gmx:100810552 749.199