Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0885 ATGATGCAGAGCAGAAGGGCAGGGTGGTGGTTGCTCCTCAGAAAGGCAAAGCTGAGCCTTAATACATACCGAAACCTCTCTACTTCTCAACACGTCATTCTCGACAACCCCAATCACAATCAGGTTTTGGTCGAAGGAAATGGTTGCTCCAGAATGGTCATTCTCAATAGACCCTCTGCTCTCAACGCTCTCAACACCAATATGGTGGCTACACTGCATAAACTTTATAGGAGTTGGGAAGATAACCCTGATATTGGTTTTGTGATGGTAAAGgGCAGTGGCCGAGCATTTGCAGCTGGTGGAGATATTGTTGCACTTTGCCATTTGATAAACAAAGGGAACATGGAAGCctgtaaagaattttttagaACGGCATATAGTTTTATGTACCTGATAGGTACATATTTGAAGCCACATGTGGCTCTTCTGAATGGCATTACCATGGGTGGTGGGGCTGGAGTTTCAATCCCTGGGACATTCCGGGTTGCAACAGACAAAACCGTATTTCTCAAGCCTATCGCTTCTCTGCAAGTCTTGACAGAAGAGTTTGGAATCTGGATTCTTCTGGCTTGCTCTTTTGTAAATTCCTCTGTGAATCTTCCACTCATTCCCTTAACCATCAAAGATTCCTTCTGGACAAATTTATCTGGCAATGTGTGTCACTTGCAATTTAAGTTCAGAGATGGTGCAGGACATTTCTACATTGCTAGTTGGCACCTTTATGTGGAGCTatatttttggcattttttattaGCAGTGGCACTGGGTATACACTTGAAGGTTTGTCAAGACTGGAAGAGGCTAAATTTCCTTGGCAACATGCTTCCTTTGCCATTCTTTGGTGCATTTGTCTGGAGCAGAATGCATGCTTATTTGAAGGAGTCTCATTggccttaa 897 0.4192 MMQSRRAGWWLLLRKAKLSLNTYRNLSTSQHVILDNPNHNQVLVEGNGCSRMVILNRPSALNALNTNMVATLHKLYRSWEDNPDIGFVMVKGSGRAFAAGGDIVALCHLINKGNMEACKEFFRTAYSFMYLIGTYLKPHVALLNGITMGGGAGVSIPGTFRVATDKTVFLKPIASLQVLTEEFGIWILLACSFVNSSVNLPLIPLTIKDSFWTNLSGNVCHLQFKFRDGAGHFYIASWHLYVELYFWHFLLAVALGIHLKVCQDWKRLNFLGNMLPLPFFGAFVWSRMHAYLKESHWP 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0885 298 SUPERFAMILY ClpP/crotonase 40 189 IPR029045 -
Ssu2g0885 298 CDD crotonase-like 42 169 - -
Ssu2g0885 298 Pfam Enoyl-CoA hydratase/isomerase 51 172 IPR045004 -
Ssu2g0885 298 Gene3D - 36 195 - -
Ssu2g0885 298 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 1, MITOCHONDRIAL 27 172 - -
Ssu2g0885 298 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 27 172 IPR032259 GO:0003860
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0885 Ssu-Chr2 45199345 45206274 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0885 41 172 Miscellaneous Gene Families AT3G60510 70.455 1.55e-54 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0885 K05605 - gmx:100801676 310.842