Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0876 ATGTTTGGATCGGACATGCCATCGACCAGGTTTGTCTCGGTTCTTCCCATGGaggcagcaacaacaacaacaactcacaTAGCCCTTGTCTCTGTCCCCGCTTTCAGCCACCAAGTCTCAATCCTCGAGTTCGCCAAGCGACTCATCGATCTCCACAACAACACCTTCCACGTCACATGCATCATTCCAACTCTTGGTTCACCCTCCAACGCCACCAAACCCTTCTTTGAAGCCCTCCCTCCAAACATTCACTGCATTTTCCTACCCTCGGCGCACTTTGAGGACCTAAAGAATAACGGGGTTTCCGTAGAAATCCAACTTCAGTTTTCGGTTTCTCGCGCCATGCCCTCCGTGATGGACGCGTTGAGATCACTCGTTAGTAACCCTAGCTCCAAAGTTGCTGCTCTCATTGCTGATGCCATGGCTCCGGAAGCACTAGAGTTTGGTAAGGAACACAGCATCTTGTCCTACGTGTACTTCCCTTGTTCCACCATGTTGCTATCACTATGCCTTCATTCTCCAAAGTTGGATGAAGAAGTTTCTTGTGAGTATAGAGATCACCCTTATTTAATAGAGATTCCGGGTTGCATCTCTATTTGTGGCATAGATCTCCCAAACAGTGTTCAAGATCGGTCGAGTTTGGAATACAAGTTGTTCCTTCAACGTTGCAACAAATACCGTGTTGTTCATGATGGTATATTGGTGAATAGCTTCGTGGAAATGGAGAAAGAGGCAACAAAAGCAATAGCCCAACAAGGCAGGGGTAATGGTAATGGTAATGGTAACTACCCTCCTGTGTATCCAATTGGGCCCATTACCCAAACTGGGCCTAGTGGTCCAAAAAGTGGGTGTGAGTGCTTATTGTGGTTGGATAAGCAGCCTCGTAACTCGGTTCTTTATGTGTCCTTTGGAAGTGGTGGTACACTCTCACAAGAGCAGATTAATGAGCTTGCTTTGGGGTTAGAATTGAGTAGGCATAAGTTTTTGTGGGTTAATTTGAGAGCACCAAATGATAGAGCCAGTGCTAGTTATTTTAGTGATGGTTTGGTGGATGATCCTTTGAATTTTTTACCTTTGGGGTTCTTAGAGAGAACCAAAGGGCAGGGTTTGGTTATGTCTGGTTGGGCCCCACAAGTTGAAGTCCTTGGTCATGAGTCAATTGGTGCATTTTTGAGTCATTGTGGTTGGAATTCGATTTTGGAGAGTGTGGTGCATGGAGTGCCAATGGTGGCTTGGCCTTTGTTTGCTGAACAAAGAACCAACGCGGCTTTGGTAACTGATGGCTTGAGAGTTGCTGTGAGACCAAAAGTTAATACTAGTGGCAATAGTGTGGTGGTGAAGGAGGAAGTTGCTAAACTCATAAAGAGTCTCATGGAGGGGTTGGAGGGTGAAGAAATTTGTAGGAGAATGAAAGAACTGCAGAAGTTTGCTGCTTCTGCTGTGATGAAAGATGGGTCGTCCACAAGGACAATATCAAAGTTGGCTCTCAAGTGGAGAAGTTTGGGCAGACCTTACTAG 1518 0.4519 MFGSDMPSTRFVSVLPMEAATTTTTHIALVSVPAFSHQVSILEFAKRLIDLHNNTFHVTCIIPTLGSPSNATKPFFEALPPNIHCIFLPSAHFEDLKNNGVSVEIQLQFSVSRAMPSVMDALRSLVSNPSSKVAALIADAMAPEALEFGKEHSILSYVYFPCSTMLLSLCLHSPKLDEEVSCEYRDHPYLIEIPGCISICGIDLPNSVQDRSSLEYKLFLQRCNKYRVVHDGILVNSFVEMEKEATKAIAQQGRGNGNGNGNYPPVYPIGPITQTGPSGPKSGCECLLWLDKQPRNSVLYVSFGSGGTLSQEQINELALGLELSRHKFLWVNLRAPNDRASASYFSDGLVDDPLNFLPLGFLERTKGQGLVMSGWAPQVEVLGHESIGAFLSHCGWNSILESVVHGVPMVAWPLFAEQRTNAALVTDGLRVAVRPKVNTSGNSVVVKEEVAKLIKSLMEGLEGEEICRRMKELQKFAASAVMKDGSSTRTISKLALKWRSLGRPY 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0876 505 CDD GT1_Gtf-like 26 484 IPR002213 GO:0008194
Ssu2g0876 505 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 288 428 IPR002213 GO:0008194
Ssu2g0876 505 ProSitePatterns UDP-glycosyltransferases signature. 375 418 IPR035595 -
Ssu2g0876 505 Gene3D Glycogen Phosphorylase B; 281 482 - -
Ssu2g0876 505 PANTHER GLYCOSYLTRANSFERASE 23 501 - -
Ssu2g0876 505 Gene3D Glycogen Phosphorylase B; 26 487 - -
Ssu2g0876 505 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 25 494 - -
Ssu2g0876 505 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 23 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0876 Ssu-Chr2 44876352 44878672 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0876 20 503 Glycosyltransferase AT1G01420 41.975 4.38e-129 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0876 K08237 - gmx:100775351 800.431