Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0875 ATGGAGAGAACTCACATAGTACTAGTTTCTGTTCCTGTTGTTAGCCATCAAATAGCAATTTCTGAATTCAGCAAGAGACTCCTTCAGCTCCATCCTAACATTAGGATCACCTTCATCATTCCAGTACTAGAGTCTCTTCCCAATGCCTCCAAATCCATCATTGTTGCTCTTTCAGCCCTCAAGATAGACACCATTGTTCTTCCGCCAGTGAACTTGCCACAAGAGACTGTCCCCGCACTCAAACTACCACTTGCAATGTCTCAGTCTCTGCCATCTATACATGATGCATTGAAGTCAATCACCTCAACATCACAGATTGTTGCTATAGTTGCAGATTATTTTGCCTATGAACTGCTGCCATTGGCCAAGaaacttaacattttatcatacatatattttcCTACAGCGGCAACATTAATTTCACTTTGTCTACATTCATCAACGCTGCACGAAACAATTTCTTGTGAATACAAAGAGCTTCAAGAACCGATCAATATCCCGGGTTGTGTGCCAATTCACGGAAGAGATCTCCCAACCTCACTTCAGGATCGGTCCAGTGAAGTTTACAAGCATTTTCTTCTGCGTTCCAAAGCACTAGGTTTTGCTGATGGTATCTTGGTCAATAGCTTTGGGGAATTGGAAGCGAGGGCGTTCAGAGCCATGATGGAAGAAAGCAGGGGTCACCCTTCAGTGTACATGGTAGGACCTATTGTACAAAATGTGTGTGACACCACTCACAATAATGGGTCACATTGTTTAGCATGGTTAGATGAGCAAACACATAGGTCTGTGCTGTTTGTCTCATTTGGTAGTGGGGGCACACTCTCTCAACACCAAATGAATGAGCTAGCTCTGGGATTGGAACAAAGTTGCCAAAAGTTTTTGTGGGTTGTGAGAGAACCAAATGACTTAACTAGTGCTAATTATTTTGGTAGTTCCTCAGGACAAGACCCTTTGAGTTTCTTACCATGTGGGTTCCTAGAGAGAAACAAAGGGCAAGGTTTGGTGATTCCATTTTGGGCACCACAGGTTGAGATCCTTAGTCACAAAGCTATTGGTGCATTCCTTAGTCATTGTGGTTGGTTTTCTACCCTTGAGTCTGTGGTGAATGGGTTGCCAATAATAGTTTGGCCACTCTTTGCTGAACAGAGAATGATTGCAACAATTCTAGTTGATGACCTCAAAGTGGCTATACGGCCAAAAGTTAATGAGAGTGGCACTGTGGAAAAGTGTGAAGTTGCCAAAGTCGTGAAGACTTTAATGGTAGGTGATGAAGGAATGGGGATTCGTAATAGAATGAAAATGCTACAAGATGCCGCTGCTAGTGCAATGACAATAGATGGATTTTCCACAACTACATTGTCTCAATTGGTAACAAAATGGAAAAGTTTGGGAGCGTGCAAGAAAAATGTTTCATGA 1419 0.4193 MERTHIVLVSVPVVSHQIAISEFSKRLLQLHPNIRITFIIPVLESLPNASKSIIVALSALKIDTIVLPPVNLPQETVPALKLPLAMSQSLPSIHDALKSITSTSQIVAIVADYFAYELLPLAKKLNILSYIYFPTAATLISLCLHSSTLHETISCEYKELQEPINIPGCVPIHGRDLPTSLQDRSSEVYKHFLLRSKALGFADGILVNSFGELEARAFRAMMEESRGHPSVYMVGPIVQNVCDTTHNNGSHCLAWLDEQTHRSVLFVSFGSGGTLSQHQMNELALGLEQSCQKFLWVVREPNDLTSANYFGSSSGQDPLSFLPCGFLERNKGQGLVIPFWAPQVEILSHKAIGAFLSHCGWFSTLESVVNGLPIIVWPLFAEQRMIATILVDDLKVAIRPKVNESGTVEKCEVAKVVKTLMVGDEGMGIRNRMKMLQDAAASAMTIDGFSTTTLSQLVTKWKSLGACKKNVS 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0875 472 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 241 389 IPR002213 GO:0008194
Ssu2g0875 472 CDD GT1_Gtf-like 5 445 IPR002213 GO:0008194
Ssu2g0875 472 PANTHER HYDROQUINONE GLUCOSYLTRANSFERASE-RELATED 3 463 - -
Ssu2g0875 472 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 463 - -
Ssu2g0875 472 Gene3D Glycogen Phosphorylase B; 249 445 - -
Ssu2g0875 472 Gene3D Glycogen Phosphorylase B; 5 451 - -
Ssu2g0875 472 ProSitePatterns UDP-glycosyltransferases signature. 340 383 IPR035595 -
Ssu2g0875 472 PANTHER GLYCOSYLTRANSFERASE 3 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0875 Ssu-Chr2 44808359 44810649 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0875 5 463 Glycosyltransferase AT1G01420 42.457 7.43e-133 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0875 K08237 - gmx:100808581 793.112