Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0872 ATGGATTCAAGTGTCGTAGGAGCAGCCCAGAGCCAAACTCCCCCACCAGAGTTCTACCAGAACGTCGTCGTAATGCGGCACGGCGATCGCATCGACAACTTCGATGCCCTGTGGGTGTCCACAGCGACCCGACCCTGGGACCCACCCCTGGTCCAACAGGGTCGGGTCCGAGCCTTCTGCACCGGACGCAAGTTCCGCAACAACCTCTCGTTCCCTATCCACCGCGTCTTCGTCTCCCCCTTCCTCCGATGCGTCCAAACCGCCGCCGAAGTCGTCGCCGCACTCGCCGCCGTCGCCGACGACCCCAACGCCCTCGTCCGCGATGACGTGCCCATCGATCCTTCCAAACTCAAGGTCTCTGTTGAATATGGGTTATGTGAAATGATGAGCAGGGCAGCGATCAGGCTTGAGGTGGCTCCTAAAGATGGAAATTGGGGTTTTGATATATCGGAGCGCGAGGCCATGCTTCCAGCAGGGACAGTGGATAAGAATGTGGAAAGGATCTATAAAGAGTTGCCCCAGTGGGAAGAAGATCCAGATTTGCACACAAGGCCTAGATATAAGCAAATAGTTAAAGACCTTGCAGACAAATATCATACTGAGAACTTGCTGCTTGTCACACACgGGGAAGGAGTTGGGGTGGCTCTTTCATCATTCAAAAAGGGTGTTACGGTGTTCGAAGTTGATTACTGTGGATACGTCCAACTTAGACGCCCAATTTTTAGGAAAGACCAGACATTTATTGCAGGAGAATTTGAAGTTCTTACTCACAATGGTCAAACTGGCGTAAATTTCATCCCAGATTAA 807 0.5217 MDSSVVGAAQSQTPPPEFYQNVVVMRHGDRIDNFDALWVSTATRPWDPPLVQQGRVRAFCTGRKFRNNLSFPIHRVFVSPFLRCVQTAAEVVAALAAVADDPNALVRDDVPIDPSKLKVSVEYGLCEMMSRAAIRLEVAPKDGNWGFDISEREAMLPAGTVDKNVERIYKELPQWEEDPDLHTRPRYKQIVKDLADKYHTENLLLVTHGEGVGVALSSFKKGVTVFEVDYCGYVQLRRPIFRKDQTFIAGEFEVLTHNGQTGVNFIPD 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0872 268 Pfam Histidine phosphatase superfamily (branch 1) 23 96 IPR013078 -
Ssu2g0872 268 PANTHER - 18 266 - -
Ssu2g0872 268 Gene3D - 19 242 IPR029033 -
Ssu2g0872 268 PIRSF PRIB5 8 268 IPR012398 -
Ssu2g0872 268 SMART PGAM_5 21 215 IPR013078 -
Ssu2g0872 268 PANTHER PHOSPHOGLYCERATE MUTASE FAMILY PROTEIN 18 266 - -
Ssu2g0872 268 CDD HP 22 87 - -
Ssu2g0872 268 SUPERFAMILY Phosphoglycerate mutase-like 22 237 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0872 Ssu-Chr2 44583884 44586922 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0872 - - gmx:100811704 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g0872 2 44583884 44586922 Ssu2g0872 2 44583884 44586922 ECH