Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0869 atgTTGCCATTGGTTACTTTACAAGTGATTTTTTACCCCTTATTGTGTTCTGGTCCTACTTCTGTTTGTAGTtgccatttaaaaattttaattttatcttattcaaAGCAAGAATGCCTTTATCCAAAGCGGCCAAGCCACTTTTGTGGGAGGTATCTACACTTTACGTCTGTACATGAAGATGATGGTGGATCTTTTGTGTATATCAGTGGAATCTGCCCTTTTGTTTATTCAAAGGACAGAAAAAGAGATCTCATGGGGTCTGCTGTTCAATATCACATCCAACACATAATTAACATCCCAGAAGAGATTGAGCCTGCACTGTGGCCTGAATGTTGCATCTACAAGGTACCTACTAGTCTTTTGAAGGTCAAAGAGGTGGCCTACACCCCTCTTTTGATCTCAATTGGCCCTGTCCACCATAACAAAGAGGAACTAAAGGAAATGCAAGAGCAGAAACACagatattttcatttcttttgggGACGCCTAGAGAACAAGCTTGATTTAGTGCACTACAAAGCCTTCCTAGAACAAGAAGAGCAAAAACTACGCCGCTGTTACCAAAAGAAATTCCCTAAAATCAACAAGGAGCAATTTGTGGAGATGATGCTGTTGGATGCTGTGTTCATCATGGAGCTGTTTCTGAGAGAAGCAAAAAAATGGGAACATAAGGATGACTATCTAATAACTCAAGGATGTGTTAGCAAAAGTATCCAGTGTGACTTGATGCTGCTTGAGAATCAGCTTCCAATGATAGTGTTGGAAAAACTATATGATAGAGTTGTCCCATGCAACGTCAAAAAGCATACCAGATTTATTAATCTTGCCCACGAGTACTTTAGATCTTATTATCCTCATGAGCAATCTTCAGAAAACAATTGGCTGGATTTGGAATAA 900 0.3767 MLPLVTLQVIFYPLLCSGPTSVCSCHLKILILSYSKQECLYPKRPSHFCGRYLHFTSVHEDDGGSFVYISGICPFVYSKDRKRDLMGSAVQYHIQHIINIPEEIEPALWPECCIYKVPTSLLKVKEVAYTPLLISIGPVHHNKEELKEMQEQKHRYFHFFWGRLENKLDLVHYKAFLEQEEQKLRRCYQKKFPKINKEQFVEMMLLDAVFIMELFLREAKKWEHKDDYLITQGCVSKSIQCDLMLLENQLPMIVLEKLYDRVVPCNVKKHTRFINLAHEYFRSYYPHEQSSENNWLDLE 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0869 299 Pfam Plant protein of unknown function 114 292 IPR004158 -
Ssu2g0869 299 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 85 295 IPR004158 -
Ssu2g0869 299 PANTHER DUF247 DOMAIN PROTEIN 85 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0869 Ssu-Chr2 44541486 44543797 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0869 - - gmx:100804849 392.504