Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0865 ATGACTTCTACTACTAGTTACACTGCTTTACCTGATGATAAACCTCAGATCCAGCACATAATTAACATTCCTGAACTGATTGAGCCTGAGGTGCATGATCAATGTTGCATTTACAAGGTTCCTCTTCATCTCCTGAATTTGAATGTGGAAGCATATACCCCACAGTTTATCTCAATAGGCCCTCTTCACAGTGATAAGCCAGAACTAAAGCAAGAGAAACAGAAACAAAGGTATTTTCATGCTTTCTGGAAACGTCTGTCTCACAAGCAGGCTTTAGCTTTGTCACAATATAAAGTCTTTCTTGAAGAGAACAGAGAAAACATAGGTAACTGTTATTCCAAGCCAGAGCTCTACAAGGAGGAAAAGTTTGTTGACATGATCCTATTAGACTCGGTCTTCATCATGGAGCTCTTTCTGAGAAAATCAAACGAATCTGAACAGAAGAATGACTTCATGTTCACCACATCATGGGTTTGCAAGATCACCCAACGCGACTTGTCACTACTTGAAAATCAGCTTCCCATGTTTGTATTGGAGGAGTTGCACACAAGGGTCATCCTTGGAGATAATGGCATCAAGGAAAACAGTGTCAGGTTTATTGAGCTTGCTTTTAACTACTTTGAAGATTATTATCCACACAACTCAAGTCAAAAAGTGGAGATGATCAAGAACTGTAAGTCTTGCAAACACTTCACTGATTTGATCAGATACACCTACCTGCCTAGACAAATCCAGGTCGAGGGGGTGAATGCGAATCCATCGCAATATTTCACCACTTGTCCAGGAGAATGTGTCTTGAGGACTGCAACAAAGTTAAATGAGGCTGGTGTTAGCTTTGAGAAAGTTCAAGGTAGGAGCTATTTAGacataaagtttgaaaacacACCAATCCTCAGCTGGTTCTTGTGCTTTGGTTGCTTACCATTCTCCACATGTTTCAAAGCTCGTTTGGAAGTACCCAATTTGAAAGTAGACCAAGTGACAGAATGTGTTCTAAGAAACCTCATTGCCTTGGAGCAGGGTCACTATTCAGACCAACCTTTCATATGCAACTATGTTTCTCTAATTGACTCACTGATTCACACTCAAGAGGATGTGGAGCTGCTGGTTGACAAAGAAATCATTGTCCATGAACTTGGCAGCCACAATGAACTGGCAACTATGATAAATGGTCTTTGCAGGCACGTTGTggtgatttcaaattattatggCAAAATCACAAAGGAACTCAATGAGCACTACAACAGCTGTTGGAAATACCATATGGGCATGCTAAGATCTGTGTACTTCCGTGACCCTTGGAGATTCAGTTCAACTATCGTGGGAATTGCTGTTTTCTTATTTGCTGTTGTCAACTTTCTAAGGGTTCTTGGCGTGCTTCGTCCACAATATTGA 1395 0.4 MTSTTSYTALPDDKPQIQHIINIPELIEPEVHDQCCIYKVPLHLLNLNVEAYTPQFISIGPLHSDKPELKQEKQKQRYFHAFWKRLSHKQALALSQYKVFLEENRENIGNCYSKPELYKEEKFVDMILLDSVFIMELFLRKSNESEQKNDFMFTTSWVCKITQRDLSLLENQLPMFVLEELHTRVILGDNGIKENSVRFIELAFNYFEDYYPHNSSQKVEMIKNCKSCKHFTDLIRYTYLPRQIQVEGVNANPSQYFTTCPGECVLRTATKLNEAGVSFEKVQGRSYLDIKFENTPILSWFLCFGCLPFSTCFKARLEVPNLKVDQVTECVLRNLIALEQGHYSDQPFICNYVSLIDSLIHTQEDVELLVDKEIIVHELGSHNELATMINGLCRHVVVISNYYGKITKELNEHYNSCWKYHMGMLRSVYFRDPWRFSSTIVGIAVFLFAVVNFLRVLGVLRPQY 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0865 464 Pfam Plant protein of unknown function 37 447 IPR004158 -
Ssu2g0865 464 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 12 460 IPR004158 -
Ssu2g0865 464 PANTHER DUF247 DOMAIN PROTEIN 12 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0865 Ssu-Chr2 44270505 44271899 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0865 - - gmx:100810276 829.32