Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0863 atggcttcttcagctACTAGTTACACTGCAGTACCTGAAACAGAACCCCATATTGAACACATAATAGACATTCCTAAACACATTGAGCCTGCATTCCATGACGTGTGCTGCATTTACAAGGTTCCTCCCAATCGCAGACAGTTCAATGAAAGGGAAGCCTATGCACCACATTTGATCTCTATAGGCCCTTTTCACCACAACAAAGCAGAACTGGAGCCAATGCATAAACAGAAGCAAAGGTATTTTCTTGCCTTCTGGGAACGTGTGACAAACAAAAAGGCTTTGGCCAAATACAAAGCCTTCCTCAATGAAAACATTGAAACGATACGCCACAGTTACTCGGATCCAGATAGCCACAGTAATGATCAGTTTGTGGACATGATTCTGTTAGACTCGGTCTTCATTTTGGAGCTGTTTCtgagaaaattaaacaaatctGAACAGAAAAATGATTACATGTTCACCACATCATGGGTTTGCAAGAGTATACAAAGAGACCTGTTACTACTTGAAAATCAGCTTCCAATTTTTGTCTTGGAAGAGTTATGCAGAAGGGTTTGTAAGCTAAACGGTGTTAGCTTCCTTGAGCTTGCATTTACCTACTTTGAAGATTACTATCCACACAAGTCAACATGTgatcaaaataaagaaatgACGATTAATTCAtcagttttgaagaaaaatgctAAACCACGTGAATGTAGTATTGTGAAATGA 717 0.3612 MASSATSYTAVPETEPHIEHIIDIPKHIEPAFHDVCCIYKVPPNRRQFNEREAYAPHLISIGPFHHNKAELEPMHKQKQRYFLAFWERVTNKKALAKYKAFLNENIETIRHSYSDPDSHSNDQFVDMILLDSVFILELFLRKLNKSEQKNDYMFTTSWVCKSIQRDLLLLENQLPIFVLEELCRRVCKLNGVSFLELAFTYFEDYYPHKSTCDQNKEMTINSSVLKKNAKPRECSIVK 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0863 238 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 2 230 IPR004158 -
Ssu2g0863 238 Pfam Plant protein of unknown function 38 213 IPR004158 -
Ssu2g0863 238 PANTHER DUF247 DOMAIN PROTEIN 2 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0863 Ssu-Chr2 44208335 44209879 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0863 - - gmx:100801122 344.354