Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu2g0856 | ATGGCAGGAGCAGAAGGGTTCGTTGAAGCAGATAATGCAGGGGCCATTATTACTAGAATTGAACACAAATCCCGCAAGATCGAAACCTTACTCAAACAGTATAAACCCGTGGAAGCTCTTAAAACCGCCCTTGAAGGCACGTATGCAATGACTGGGGACGAGCGTTGCAAGTCGGCACATTGGATTGTGGTGCATAGAGCTATAATGGCTATAAAAGATGTGGATGGGATGCTTTCTTCCTTGGATCCCGAGTACTATGATATCCTAATGAAGTACTTGTATAGAGGCTTAGCTACAGGAGATCGTCCCACATGTGACCAATGCCTTCGGATTCATGAAAAATTGACAGAGAAAGCAGGACTAGGTTGCATCCTACGTTTCCTGACTGATACTGTAAATACAGTTTGA | 408 | 0.4436 | MAGAEGFVEADNAGAIITRIEHKSRKIETLLKQYKPVEALKTALEGTYAMTGDERCKSAHWIVVHRAIMAIKDVDGMLSSLDPEYYDILMKYLYRGLATGDRPTCDQCLRIHEKLTEKAGLGCILRFLTDTVNTV | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu2g0856 | 135 | SUPERFAMILY | Arp2/3 complex 16 kDa subunit ARPC5 | 9 | 131 | IPR036743 | GO:0005885|GO:0015629|GO:0030833|GO:0034314 | |
| Ssu2g0856 | 135 | Pfam | ARP2/3 complex 16 kDa subunit (p16-Arc) | 18 | 131 | IPR006789 | GO:0005885|GO:0015629|GO:0030833|GO:0034314 | |
| Ssu2g0856 | 135 | PANTHER | ARP2/3 COMPLEX 16 KD SUBUNIT P16-ARC | 5 | 133 | IPR006789 | GO:0005885|GO:0015629|GO:0030833|GO:0034314 | |
| Ssu2g0856 | 135 | PANTHER | ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 5 | 5 | 133 | - | - | |
| Ssu2g0856 | 135 | Gene3D | - | 17 | 132 | IPR036743 | GO:0005885|GO:0015629|GO:0030833|GO:0034314 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ssu2g0856 | K05754 | - | gmx:100809745 | 267.314 |