Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0853 ATGGGGATGGTTATGAGTTACATGGGAGGAACAGGAGTTGAGTTTGCATCCAAGGCGATGACTATGACAACAGGAACACTCTATGATCGGGttattgagaagaaaaaaatcgaAAACTTTGAGGACTTCCACGTTGCCATTCTTGATATCTTCAATGCAATCAACACGTCCTTGCCCGGTAAGCATTATGATGCACCGGCACTCGATGATGTACAGaaattttatgaaaaatggaaTGAATCCGACGGTGATAAAAAGGAACGCTTCACCGACTACATGAATGAGAAAGTGAATCTCAGCAAAGCAGATGAATCTATGATGATCACTGGGATACTGGCTCCACCACTTGCCTTGGTAGCTAAGAAAACTGGACAGTCTCTGCCCCAGCTAGGTGTTATGAAAGCCATCCCTGATGTTGCCTTTGTTCCCGGAGCTACCATTTTGGCTCTCATTGCTACTAAGCTGACCAAAAGAATGGCATTCAAGAACCTCCCATCCTAG 501 0.4251 MGMVMSYMGGTGVEFASKAMTMTTGTLYDRVIEKKKIENFEDFHVAILDIFNAINTSLPGKHYDAPALDDVQKFYEKWNESDGDKKERFTDYMNEKVNLSKADESMMITGILAPPLALVAKKTGQSLPQLGVMKAIPDVAFVPGATILALIATKLTKRMAFKNLPS 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0853 166 PANTHER CALCIUM ION-BINDING PROTEIN 1 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0853 Ssu-Chr2 43873514 43876100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0853 1 137 EF-hand Containing Proteins AT1G64850 27.083 1.73e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0853 - - var:108347314 254.603