Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0852 ATGTACATCTGGAAGCTTTTTGTCATTGCATTAATGCCAAATCTGAAAGTGCTGTTGATTACTGCTGCTGGCACCTTCCTTGCAATTAATCGCTTTGACATACTCAGTGAAACTGTCAGGAAAAACATGAATACTaTGGTGTATTTTGTCTTTTCTCCTGCTCTTGTTTGTAGCAGCCTGGCTAAAACCATAACTTTAAGGAGTATGATTAAGTTGTGGTTCATGCCGCTGAGTATTCTTCTCACAGTTATTATTGGGACAACTCTTGGATGGttacttattaaaataactagAGTTCCTCATCGTCTTCGAGGCCTTGTGTTGGGGTGCTGTGCTGTAGGAAATCTGGGAAATTTGCCTCTTATTATAGTTCCAACTATTTGTAAGGAAAAAAGCAATCCATTTGGAGATGTGGATGTTTGTTACAGAAACGGACTGGCATATGCTTCCCTGTCATTGGCACTAGGATCCATTTTAGTGTGGTCATATGCGTTCAACATTGTGCGCATATATTCAACTCAAGAGATTTCCAATGTCGTCAAAGTTGATGAATTCACAGTAAATCCAACATCTGCAACAGAAACTGATCCagaaaacttttcaaaatgcTCCACACGAACATTGGTTACAGCTGAGGATAGATCACAGACCAACAATTGTGTGAATCAACTTCAAATTGAAACTATAGTTCCAGATGGACAAGGAAAGGTAccagaaaagttaaacattaTGAAACAGCTGAAAATGTTAGCTTACAAGATCACCAACATGAAGATACTAATTGCACCTTCAACGATGGCAGCGATTATTGGTTTGACAATTGGTGTTGTCCCTCACTTTCGAAAACTACTAGTTGGCGACAGTGCTCTTTTCCATGTGGTTCAAGACACTGCAACCATGCTGGGGGATGCAAGCGTTCCCGTAATGGTCTTATTGCTTGGGGCAAATCTTGTCAAGGGTTTAAAAGGAATTGGAAAGCAACTTCCACTTATTGTTGGCATTATTGTGGTTAAATTTATTGCCTTGCCAGCAATAGGTATAGGCATTGTCAAAGGTGCAGTTCATTTCAGCTTGATCCACCCTGATCCATTGTATCAGTTTGTTTTACTGCTTCAATATGCCCTCCCACCTGCGATAGTTGTGAGTACAATTACTCAAATGTATGGAGTTGGTGAGGGTGAATGCTCAGCTATCATGTTAGCAACTTATTCCTGTGCTGCAGTTTTGCTTACTCTCTGGTGCACATTGTTTATGTGGCTTGTACTATAA 1269 0.3893 MYIWKLFVIALMPNLKVLLITAAGTFLAINRFDILSETVRKNMNTMVYFVFSPALVCSSLAKTITLRSMIKLWFMPLSILLTVIIGTTLGWLLIKITRVPHRLRGLVLGCCAVGNLGNLPLIIVPTICKEKSNPFGDVDVCYRNGLAYASLSLALGSILVWSYAFNIVRIYSTQEISNVVKVDEFTVNPTSATETDPENFSKCSTRTLVTAEDRSQTNNCVNQLQIETIVPDGQGKVPEKLNIMKQLKMLAYKITNMKILIAPSTMAAIIGLTIGVVPHFRKLLVGDSALFHVVQDTATMLGDASVPVMVLLLGANLVKGLKGIGKQLPLIVGIIVVKFIALPAIGIGIVKGAVHFSLIHPDPLYQFVLLLQYALPPAIVVSTITQMYGVGEGECSAIMLATYSCAAVLLTLWCTLFMWLVL 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0852 422 Pfam Membrane transport protein 11 413 IPR004776 GO:0016021|GO:0055085
Ssu2g0852 422 PANTHER EFFLUX CARRIER FAMILY PROTEIN, PUTATIVE-RELATED 1 421 - -
Ssu2g0852 422 PANTHER - 1 421 IPR045033 GO:0080162
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0852 Ssu-Chr2 43845316 43861293 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0852 K24139 - gmx:100807965 635.95