Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0851 ATGGACTTTTGGAAGCTTTTCATGGTTGCATTAATGCCAGTTTTGAAGGTATTGTTGATTACTGCTGTGGGGACAATCCTTGCAATTAATCGCTTTAACATACTTGGGGAAACTGCCAGGAAAAACCTGAATACTATAGTATTTTTTGTCTTCTCTCCAACTCTAGTTTGTAGCAGCCTAGCTGAAACAATAACTTTGAGGAGCGTGGTTATACTGTGGTTCATGCCCGTGAATATTCTTCTTACATTTATCATTGGGACAGTTCTTGGattgttaattgttaaaatatctaGAGTTCCTCATCATCTTCAAGGCCTTGTGTTAGGGAGCTGTGCAGCAGGAAATCTGGGAAATTTGCCTATAATTATAGTTCCAGCTGTCTGTAAACAAAGCAACAGTCCTTTTGGAGATGTGAATGTTTGCTACAAAAATGCACTAGCATATGCTTCTCTTTCAATGGCAtTAGGATCCATTTACATTTGGTCCTATGCATACAACCTTGTTCGATTATATACACCAAAGATTTCCAATGAAGTCCAAGTTGATGACGATTCCATGGTAAATCCGGCGTCCACAACAAAAACTGATCCAGAAAATCCTTCAACATGTTCCACGGGATTACCAATTGTTACTGCTGAAGATAGATCACAAACTGAAGATCGCGTGAAGCACTTTGAAATTCAATGTACAGTGCGTGATGGACAAATAGAGGAGgtaccaaaaagaaaaatgattgtGAAACAGCTGAAAACATTAGTCGAAAAAATCAACTTGAAAGTACTACTCACACCTTCCACGATTGGAGCGATTGCTGGTTTAATAATTGGAGTAGTTCCTTTGTTTCGGAAACTATTAATTGGTGATAAGGCTCCTCTCCGTGTGGTTGAGGAATCTGTAGTCATGCTGGGGTATGCTTGCATTCCGGCGATGACTTTGTTGGTTGGAGCAAATCTTATCAAAGGTTTGAATGGACTAGGAAAGCAGCTTCCACTCATTGTTGGAGTTACTGTGGTTAGATGTATTGCCTTGCCAGTAATAGGTGTAGGTGTAGTGAAAGGTGCTGTTCGTTTTGGCTTGATCCACCCTGATCCATTATATGAGTTTCTTTTGCTGCTTCAATTTGCCCTTCCTCCTGCAGTATCCATGAGTACGATGACTCAATTATTTGGAGCTGGTGAGGGTGAATGCTCAGTAATCTTGTTTGCAACTTATTCCTGTGCAGCAGTTTCAGTAACACTTTGGTGCACATTTTATATGTGGCTTGTACTGTAA 1272 0.3923 MDFWKLFMVALMPVLKVLLITAVGTILAINRFNILGETARKNLNTIVFFVFSPTLVCSSLAETITLRSVVILWFMPVNILLTFIIGTVLGLLIVKISRVPHHLQGLVLGSCAAGNLGNLPIIIVPAVCKQSNSPFGDVNVCYKNALAYASLSMALGSIYIWSYAYNLVRLYTPKISNEVQVDDDSMVNPASTTKTDPENPSTCSTGLPIVTAEDRSQTEDRVKHFEIQCTVRDGQIEEVPKRKMIVKQLKTLVEKINLKVLLTPSTIGAIAGLIIGVVPLFRKLLIGDKAPLRVVEESVVMLGYACIPAMTLLVGANLIKGLNGLGKQLPLIVGVTVVRCIALPVIGVGVVKGAVRFGLIHPDPLYEFLLLLQFALPPAVSMSTMTQLFGAGEGECSVILFATYSCAAVSVTLWCTFYMWLVL 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0851 423 PANTHER - 1 422 IPR045033 GO:0080162
Ssu2g0851 423 Pfam Membrane transport protein 10 414 IPR004776 GO:0016021|GO:0055085
Ssu2g0851 423 PANTHER EFFLUX CARRIER FAMILY PROTEIN, PUTATIVE-RELATED 1 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0851 Ssu-Chr2 43824714 43831726 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0851 K24139 - gmx:100797947 690.263