Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0840 aTGGCTTCTACTGCTGTTGCCACCGCCGCGAGGAACGAACCGCCGCCGCCACCGGCGGATCCTTCGCCGTCGTCCTCCCCCGAAACCGGTGATGGGAGCGATTCGTTCAATTCCTCGCCGAACCACTTCTCCGACTGTGAAATTCAGtcTCCGGACGTATTGAAGAGTGAAGAGTATCGTCAATTGTTCCGTCTTCCACCGGAGGAAgTTCTTATTGAAGATTTTAATTGTGCCCTCCAGGATAACATACTTATTCAGGGTCATATGTACCTCTTTGTCAACTTCATTTGTTTCTACTCAAACATTTTTGGGTTTGAGACAAAGAGAATAATCCCATTACCGGAAGTCACAAGTGTAAGGAGGGCAAAGACGGCTGGGATCTTTCCCAATGCCATTGAGATTCTTGCTGGAAACAGGAAGTACTTCTTTGCATCCTTCCTATCCCGCGATGAAGCTTTCAAGATTATTAATGATGGATGGTTGCGGCCTGGCAATGAAACCAGAGCAATTTCGGAACAGAAGGAATCAATGTCTGAGTCCAGCAGCCAAGAGAATGGATTTGTAGCTGTTGAAAATGTCAAAAGTTCTGATATACTGGACAATGAGTCGCTTTCTACTGACCTGAGCAAAGATACTTTTATGTGCAAAGATATGGGGCTTCCATCCATTGTAGGAGATGACCCTGTATTGATGGTGGATTCAGAGAAGCAATGGAGTGTAAAACTGGTTGCTGAACCTGAATTGAATAATGATGCCCCAAGTGTGAGTTGGAAGTGGAATGAGGAGGATATTGATGCTCCAACAACCCATGAAGCATATACATGTGTTACAGATTCAGTGTTTCCGATAAAGGTTGAAGACTTCTTTAGGTACTTTTTCTCAGATGATGCTGTAAATTTTCTTGAGTCTTTTCATAAAAGATGCGGTGATAAAGACTTCAAGTGTGCTTCATGGCATCCTCAAGAGAAATTTGGGTATGCTCGTGAACTGTCTTTTCAACATCCAATAAAACTTTATCTTGGAGCAAAATTTGGTGGCTGCCATGAGGTCCAGAAATTTCGAGTTTATAGGAACAGTCAATTGGTTATAGAGACATCGCAAGAAGTCAGTGATGTGCCTTATGCAGATTATTTCCATGTTGAGGGACTGTGGAATGTAGAGAGAGACAAGGATGCATCAAAAGAATGCTGCATTTTGCGGGTATATGTGAATGTGGCgttttctaaaaaaactatTTGGAAAGGCAAAATAATACAGTCAACAATTGAAGAATGTAGAGAGGCTTATGCGACATGGATGGACATGGCACATGAAATGTTGAAGCAGAAGAACCTTGAAAAACAAGCTCAAAATGGTCAAAtgaatttagaaagagaagtGAAGACTGGAGAATCTTCAGAAGGGTCACAGGAGCAAAGTAACCCTACAAAGACACTTGCTACATCCAGTGCCTTTGATGCTACCCACAATGTTGGCACTCACTTGCAAGGAAATTTCATTGACACATCATCTGTTCCATTGTTCAAAGAGTTTATGACAAAGTTCAGATCATCTTTGAAAAGTCACAGCAATCATTCTCTGCTCCTTGTTACTATTGTCGCTCTGATTTTCTTCATGCAGCAGTTTAGCATACTTGTGCTATTGGCCAGACCTCAACACATACATATGAACACTCCTGTGGACTTCATGAATAGGATGGATAATCGAGTGACCAGAAGTCCTTCAGACATAGCGTGGCTGGAGAAAAGAATTCATCACCTTAAAGATGAGATGTACATGGTTGAGAGTAGGCTTGAAAGGATGCGGTATGAACATTCACTCTTAAAAAAGCAACTAAACGACCTAGAACATAAGTAG 1857 0.4146 MASTAVATAARNEPPPPPADPSPSSSPETGDGSDSFNSSPNHFSDCEIQSPDVLKSEEYRQLFRLPPEEVLIEDFNCALQDNILIQGHMYLFVNFICFYSNIFGFETKRIIPLPEVTSVRRAKTAGIFPNAIEILAGNRKYFFASFLSRDEAFKIINDGWLRPGNETRAISEQKESMSESSSQENGFVAVENVKSSDILDNESLSTDLSKDTFMCKDMGLPSIVGDDPVLMVDSEKQWSVKLVAEPELNNDAPSVSWKWNEEDIDAPTTHEAYTCVTDSVFPIKVEDFFRYFFSDDAVNFLESFHKRCGDKDFKCASWHPQEKFGYARELSFQHPIKLYLGAKFGGCHEVQKFRVYRNSQLVIETSQEVSDVPYADYFHVEGLWNVERDKDASKECCILRVYVNVAFSKKTIWKGKIIQSTIEECREAYATWMDMAHEMLKQKNLEKQAQNGQMNLEREVKTGESSEGSQEQSNPTKTLATSSAFDATHNVGTHLQGNFIDTSSVPLFKEFMTKFRSSLKSHSNHSLLLVTIVALIFFMQQFSILVLLARPQHIHMNTPVDFMNRMDNRVTRSPSDIAWLEKRIHHLKDEMYMVESRLERMRYEHSLLKKQLNDLEHK 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0840 618 Coils Coil 598 618 - -
Ssu2g0840 618 MobiDBLite consensus disorder prediction 1 41 - -
Ssu2g0840 618 SMART gram2001c 57 123 IPR004182 -
Ssu2g0840 618 Pfam GRAM domain 59 158 IPR004182 -
Ssu2g0840 618 MobiDBLite consensus disorder prediction 457 479 - -
Ssu2g0840 618 Pfam VAD1 Analog of StAR-related lipid transfer domain 276 423 IPR031968 -
Ssu2g0840 618 MobiDBLite consensus disorder prediction 25 41 - -
Ssu2g0840 618 Gene3D - 55 162 IPR011993 -
Ssu2g0840 618 ProSiteProfiles VASt domain profile. 272 444 IPR031968 -
Ssu2g0840 618 CDD PH-GRAM_GRAMDC 67 160 - -
Ssu2g0840 618 PANTHER PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC 18 616 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0840 - - gmx:100805910 1018.84