Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0837 atggagaacgaggaagaagaagaagtggtGGCTGAAGTTGAAGCAGTGGAAGCCGTGTATGGAACCGATTGCGTCCTTCTCCGTTCATTCCCTCCCCATTTTCACATCTCTCTCAAACCCAGGACCGCCGATGTTTCCTCCCAACAgtTTGTAGAAGCTGTTCTGGAGATACGAGCAAGCCCACAGTATCCCAAAGAACCACCTTCTGTTGATCTTGTAGATTGCAAGGGTCTGGATGAACAGAGACAGAAGCATCTATTAAATTACATACAGAATAAAGCCTACGAGCTCTCCCCTTGTTTAATGCTTGTAGCTGTCTGTGAGGAAGCTGTAGAGAAACTTTCAGCTATGAATCATCCTGATGGTGATTGTCCATTATGTTTATTCCCTTTGGTCCCAGAAGATCAGCAAAGTGAAACCTTGccttttatgaaattaatgtcTTGCTTTCATTGCTTTCACAGTGAATGTATCATTAGATGGTGGAAATGGCTTCAAGATTCTAAAGTAGACTCTGCCAATACAGATAGTGCAGCTGCACATCGTAACCAAGATAATCATGAGAAAATGGAAGAGAGTATTGGAAACTGCCCAGTCTGTCGCAAGCCTTTTCTTGCCAAGGATTTGGACCATGTGCTTGCTCTAGTTGGTTCATATTCTTCCCAATTGAGTTTGGATAATGATGAAGTCAATGATGAGGAAAAGCTCCTTCGATCAGAGGATGAGATCATTAGGAGACAGAAATTTGAAGCCATCTTAAATTTACAGAAGGAGAACAGTGGTTTGATTGAACCCAAAAGAGATATAGTAATATTGCCTGGTATGTATCTTCCACAACCAGTTGCAATGCCCAGCTCCACGTCAACCAAGGAATCTGATGAGCAGCAACAAAAAGATCCACCTGCAGCTGTGTCAGGAAAACATGCCAATGGGATGTCCAACGGATCTAGTTCTAGCAGGCAGAGGAATTTCGGTGCAAGGAGGCAGAAACCAAGAAGTGATCATCACCACTCTAGTTCAACTGTAAGAAATCCAAGAAAACCAGTCCAACAGTGGGTACGAAGAGATAATCCTAGCAATAAGCAATAG 1089 0.4123 MENEEEEEVVAEVEAVEAVYGTDCVLLRSFPPHFHISLKPRTADVSSQQFVEAVLEIRASPQYPKEPPSVDLVDCKGLDEQRQKHLLNYIQNKAYELSPCLMLVAVCEEAVEKLSAMNHPDGDCPLCLFPLVPEDQQSETLPFMKLMSCFHCFHSECIIRWWKWLQDSKVDSANTDSAAAHRNQDNHEKMEESIGNCPVCRKPFLAKDLDHVLALVGSYSSQLSLDNDEVNDEEKLLRSEDEIIRRQKFEAILNLQKENSGLIEPKRDIVILPGMYLPQPVAMPSSTSTKESDEQQQKDPPAAVSGKHANGMSNGSSSSRQRNFGARRQKPRSDHHHSSSTVRNPRKPVQQWVRRDNPSNKQ 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0837 362 Pfam RWD domain 7 113 IPR006575 GO:0005515
Ssu2g0837 362 SMART ring_2 124 200 IPR001841 -
Ssu2g0837 362 MobiDBLite consensus disorder prediction 343 362 - -
Ssu2g0837 362 PANTHER RING FINGER PROTEIN 25 4 347 IPR039133 GO:0061630
Ssu2g0837 362 SUPERFAMILY RING/U-box 116 207 - -
Ssu2g0837 362 ProSiteProfiles RWD domain profile. 11 117 IPR006575 GO:0005515
Ssu2g0837 362 Gene3D Ubiquitin Conjugating Enzyme 1 119 IPR016135 -
Ssu2g0837 362 MobiDBLite consensus disorder prediction 281 362 - -
Ssu2g0837 362 MobiDBLite consensus disorder prediction 309 324 - -
Ssu2g0837 362 ProSiteProfiles Zinc finger RING-type profile. 124 201 IPR001841 -
Ssu2g0837 362 SMART RWD2001b 11 117 IPR006575 GO:0005515
Ssu2g0837 362 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 120 215 IPR013083 -
Ssu2g0837 362 SUPERFAMILY UBC-like 5 114 IPR016135 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0837 K10640 - gmx:100791789 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g0837 2 43294688 43302446 Ssu2g0837 2 43294688 43302446 ECH