Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0831 ATGGCTAAAACAATTGTAGCTTCTTTCTTGGTTCTGCTGCTGGCTTTCCCCACTGTATTTGGAACTGACTTTGATGTTGGTGATAGTAGTGGATGGGCCCTAGGAACTGATTACAGCACCTGGGCCTCTGGGAAAACCTTCAAAGTTGGTGACAATTTGGTGTTCAAATATGACTCGACCCATCAAGTTGATGAAGTTAATGAGAGTGGCTACAGCAGCTGCAGTTCAAGCAACGCCATCAAGAACTACCAGGATGGAAACACCAAAATTGCATTGTCTTCAGCTGGCAAAAGGTACTTCTTGTGCCCCACGGCAGGTCACTGTGCTGGAGGCATGAAGCTGTCAATCAATGTAGTGGCTGCTAGTGGCACCCCACCAACCAGCCCAAGTGGCACACCCCCTACCACCCCATCAACTCCTTCTCCTCCCTCGTCAGGATCCCCTGCAACCAACACTACTGCACCAGCACCAAAGTCTAGTGGAGCAGTCGGTGTTTCCAGTGGCATTAGTCTTTTGGTGGGGTCTTTCTTTGCTTCAGCAATTATGTTTGGTTTCATGGGCTAG 564 0.4911 MAKTIVASFLVLLLAFPTVFGTDFDVGDSSGWALGTDYSTWASGKTFKVGDNLVFKYDSTHQVDEVNESGYSSCSSSNAIKNYQDGNTKIALSSAGKRYFLCPTAGHCAGGMKLSINVVAASGTPPTSPSGTPPTTPSTPSPPSSGSPATNTTAPAPKSSGAVGVSSGISLLVGSFFASAIMFGFMG 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0831 187 MobiDBLite consensus disorder prediction 122 160 - -
Ssu2g0831 187 CDD Phytocyanin 22 118 - -
Ssu2g0831 187 ProSiteProfiles Phytocyanin domain profile. 22 120 IPR003245 GO:0009055
Ssu2g0831 187 Pfam Plastocyanin-like domain 33 112 IPR003245 GO:0009055
Ssu2g0831 187 Gene3D - 21 124 IPR008972 -
Ssu2g0831 187 SUPERFAMILY Cupredoxins 21 119 IPR008972 -
Ssu2g0831 187 PANTHER BLUE COPPER PROTEIN 6 137 IPR039391 GO:0009055
Ssu2g0831 187 MobiDBLite consensus disorder prediction 127 144 - -
Ssu2g0831 187 PANTHER CUPREDOXIN SUPERFAMILY PROTEIN-RELATED 6 137 - -
Ssu2g0831 187 MobiDBLite consensus disorder prediction 145 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0831 Ssu-Chr2 43150641 43151802 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0831 17 121 Miscellaneous Gene Families AT3G60280 52.381 1.20e-35 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0831 - - gmx:100803164 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g0831 2 43150641 43151802 Ssu2g0831 2 43150641 43151802 ECH