Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0830 ATGCCAGTTATATTCTCAAACTACAAGCTCGAGACAGAAACTTACTTAAATGCCAAACTCTCCGATATATGCCTCGGGACTTCGGCTGCACCGACTTATCTACCAGCCCACAAATTTGAGAATGACGGTCATGGATTTAGTTTGATTGATGGTGCTATGGCTGCTAATAATCCAgcGCTGGTTGCTGTGAGCGAAGTGATACAGCACATTGAGCGAAAAGAAATCCTGTTGCTGTCACTAGGAACTGGAACTGGAACAGCAGAAGTTGAGGAGAAGTTATCTGGCAATTTAGGAAATCCTGTCACTGAGCAAAATGAAATCCCGTTGACGTCACTAGGAACTGGAACTGGAACAACAGAAGTTGAGGAGAAGTTATCTGGCAATTTAGGAAATCCTGTCACTGAGCAAAATGAAATCCTGTTGACGTCAGTAGGAACTGGAATAAAAGAAGTTAAGAAGAAGTTATCTAGCTTATTTGAAGGCGTGCATGGCGGTTATTGGCTACTTAACAACATTGGGGTTGTTAGTGAGGCTGTATATAGTACAGATATGATCCAGTACTACCTTGCCACAGTGTTCCCAGGCCTCTTGCCTGCAGATAACTACCTTCGAATTCAGGAGTATAACCTGGATCCATCCATGGAACCAATGGATAATGCTGACGAAAAAAACATGGATAACCTTGAAAAGGTAGGAAATGACCTGTTGCAACAAAAAGTCAAGAGGATGAACATGAATACATTTATCCCAGTTGAAATGAACCAAACAAATGCTGAAGCTCTTGACAGcTTGGCTGAGAAATTATATCAAGAGAGGCAGTTGCGTCTGAAAAGGAACTCTATGGCAAAAGGAGGAAGCCCAGCAACTTAA 870 0.4195 MPVIFSNYKLETETYLNAKLSDICLGTSAAPTYLPAHKFENDGHGFSLIDGAMAANNPALVAVSEVIQHIERKEILLLSLGTGTGTAEVEEKLSGNLGNPVTEQNEIPLTSLGTGTGTTEVEEKLSGNLGNPVTEQNEILLTSVGTGIKEVKKKLSSLFEGVHGGYWLLNNIGVVSEAVYSTDMIQYYLATVFPGLLPADNYLRIQEYNLDPSMEPMDNADEKNMDNLEKVGNDLLQQKVKRMNMNTFIPVEMNQTNAEALDSLAEKLYQERQLRLKRNSMAKGGSPAT 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0830 289 Gene3D Cytosolic phospholipase A2 catalytic domain 1 281 - -
Ssu2g0830 289 MobiDBLite consensus disorder prediction 96 118 - -
Ssu2g0830 289 SUPERFAMILY FabD/lysophospholipase-like 2 85 IPR016035 -
Ssu2g0830 289 PANTHER XYLOSE ISOMERASE 2 96 - -
Ssu2g0830 289 PANTHER PATATIN 2 96 - -
Ssu2g0830 289 PANTHER PATATIN 134 281 - -
Ssu2g0830 289 SUPERFAMILY FabD/lysophospholipase-like 167 251 IPR016035 -
Ssu2g0830 289 PANTHER XYLOSE ISOMERASE 134 281 - -
Ssu2g0830 289 MobiDBLite consensus disorder prediction 97 118 - -
Ssu2g0830 289 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 1 63 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0830 Ssu-Chr2 42974436 43083989 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0830 2 283 Acyl Lipid Metabolism Gene Families AT4G37050 32.872 1.57e-38 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0830 - - gmx:100798569 303.523